Gene Sputcn32_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0620 
Symbol 
ID5080410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp684819 
End bp685325 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content48% 
IMG OID640497746 
ProductMarR family transcriptional regulator 
Protein accessionYP_001182150 
Protein GI146291726 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGCA GGCTAAGTAA ACTGGTAAGC ATGATGCAAA CAGAATTAGA GCGTTTAAAG 
GAATTATCCC TCGCGGAACA TTTAGGCCGT CTACATCGGT TGTGGCGCAC TGTCGCCGAT 
GTTGAATTGG CACCTTTAGG ATTAACTCAT CCACGCTGGA CTGCCCTATG GAAACTGCTG 
CGTTTAGGCG ACAACCTGAG TCAAAAAGTA TTGGCCGATG CGCTAGAGAT TGAATTGGCT 
TCGCTTATGC GCACTTTAGG ACAATTAGAG GAGCAGGGCT TAGTCGAGCG TCATTGCTGC 
GACAAAGATA AGCGGGCAAG GATTGTGAGT CTGACGCCTG CGGGATTAGA GGTTTTAAAG 
CAAATGGAAG CGCGGATTAT TCAAGTTCGC CGTGAGTTAC TCGATGGGAT CAGTGCCACT 
GAACTCAGTG AATTTGAACG CATTATTAGC CTGATCAGTG ACAACGCCAG CGCCAAATTA 
GCCAAGGTAA CAGACACCAT TTTGTGA
 
Protein sequence
MLSRLSKLVS MMQTELERLK ELSLAEHLGR LHRLWRTVAD VELAPLGLTH PRWTALWKLL 
RLGDNLSQKV LADALEIELA SLMRTLGQLE EQGLVERHCC DKDKRARIVS LTPAGLEVLK 
QMEARIIQVR RELLDGISAT ELSEFERIIS LISDNASAKL AKVTDTIL