Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0618 |
Symbol | metF |
ID | 5080408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 681777 |
End bp | 682664 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497744 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_001182148 |
Protein GI | 146291724 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTTC ATCACGCACA ACATTCACAT TCGCTAAACC AGAGCTTGTC TGAGCTTAAT GGCGATATTA ATGTTTCTTT TGAGTTTTTT CCTCCATCGA CCCCCGAAAT GGAACAGATC CTATGGAATT CTATCCGTCG TTTAGAGCCA CTGAATCCTA AGTTTGTGTC TGTGACTTAT GGTGCTAACT CTGGCGTACG TGACCGTACC CATGGCGTGA TTGAGCGTAT CCAACAGGAA ACTGACCTTG TTGCCGCGCC GCACTTAACC TTAGTGGACG CCAGCGATGA AGAGTTATTA GAATTGGCTA AGCATTACTG GAAATCGGGC ATTCGTGACA TAGTGGCCCT ACGGGGTGAT TTACCCGCAG GCAGCCCAAA GCCAACCCGT TTTGCGGCCG ATTTAGTGCG TTTGCTGCGT TCTGTGGCTG ACTTTGATAT TTCCGTTGCG GCCTATCCAG AAGTGCACCC CGATGCGAGC AATGCACAGG CGGATTTGAT CAACCTTAAG CGTAAGATTG ATGCGGGTGC AAGCCGTGCC ATTACCCAAT TTTTCTTCGA TGTGGAATCT TATCTGCGTT TTCGTGATCG CTGTGTCGCG GCCGGTATCG ATGTTGAAAT CGTGCCTGGC ATCTTACCTG TGACTAACTT TACCCAGCTA AAACGTTTCG CGGGCATGAC CAATGTGTCG TTACCTAATT GGTTACATAA GCAATTTGAT GGCCTAGAAA ACGATGCGGG TACACGCCAA TTGGTGGGGG CAAACGTGGC AATCGATATG GTAAAAGTAT TGTCCCGCGA AGGCGTGAAG GATTTCCATT TCTACACCTT AAATCGCGCC GAATTGACCT ACGCGATTTG CCACACTTTA GGCGTGCGTC CTAAATAA
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Protein sequence | MAFHHAQHSH SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY GANSGVRDRT HGVIERIQQE TDLVAAPHLT LVDASDEELL ELAKHYWKSG IRDIVALRGD LPAGSPKPTR FAADLVRLLR SVADFDISVA AYPEVHPDAS NAQADLINLK RKIDAGASRA ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPNWLHKQFD GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPK
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