Gene Sputcn32_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0618 
SymbolmetF 
ID5080408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp681777 
End bp682664 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content48% 
IMG OID640497744 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001182148 
Protein GI146291724 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTC ATCACGCACA ACATTCACAT TCGCTAAACC AGAGCTTGTC TGAGCTTAAT 
GGCGATATTA ATGTTTCTTT TGAGTTTTTT CCTCCATCGA CCCCCGAAAT GGAACAGATC
CTATGGAATT CTATCCGTCG TTTAGAGCCA CTGAATCCTA AGTTTGTGTC TGTGACTTAT
GGTGCTAACT CTGGCGTACG TGACCGTACC CATGGCGTGA TTGAGCGTAT CCAACAGGAA
ACTGACCTTG TTGCCGCGCC GCACTTAACC TTAGTGGACG CCAGCGATGA AGAGTTATTA
GAATTGGCTA AGCATTACTG GAAATCGGGC ATTCGTGACA TAGTGGCCCT ACGGGGTGAT
TTACCCGCAG GCAGCCCAAA GCCAACCCGT TTTGCGGCCG ATTTAGTGCG TTTGCTGCGT
TCTGTGGCTG ACTTTGATAT TTCCGTTGCG GCCTATCCAG AAGTGCACCC CGATGCGAGC
AATGCACAGG CGGATTTGAT CAACCTTAAG CGTAAGATTG ATGCGGGTGC AAGCCGTGCC
ATTACCCAAT TTTTCTTCGA TGTGGAATCT TATCTGCGTT TTCGTGATCG CTGTGTCGCG
GCCGGTATCG ATGTTGAAAT CGTGCCTGGC ATCTTACCTG TGACTAACTT TACCCAGCTA
AAACGTTTCG CGGGCATGAC CAATGTGTCG TTACCTAATT GGTTACATAA GCAATTTGAT
GGCCTAGAAA ACGATGCGGG TACACGCCAA TTGGTGGGGG CAAACGTGGC AATCGATATG
GTAAAAGTAT TGTCCCGCGA AGGCGTGAAG GATTTCCATT TCTACACCTT AAATCGCGCC
GAATTGACCT ACGCGATTTG CCACACTTTA GGCGTGCGTC CTAAATAA
 
Protein sequence
MAFHHAQHSH SLNQSLSELN GDINVSFEFF PPSTPEMEQI LWNSIRRLEP LNPKFVSVTY 
GANSGVRDRT HGVIERIQQE TDLVAAPHLT LVDASDEELL ELAKHYWKSG IRDIVALRGD
LPAGSPKPTR FAADLVRLLR SVADFDISVA AYPEVHPDAS NAQADLINLK RKIDAGASRA
ITQFFFDVES YLRFRDRCVA AGIDVEIVPG ILPVTNFTQL KRFAGMTNVS LPNWLHKQFD
GLENDAGTRQ LVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPK