| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0616 |
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| Symbol | |
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| ID | 5080406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 677972 |
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| End bp | 679135 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640497742 |
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| Product | O-succinylhomoserine (thiol)-lyase |
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| Protein accession | YP_001182146 |
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| Protein GI | 146291722 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR02080] O-succinylhomoserine (thiol)-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAGC GTCAATTAGC CACACTGGCA GTGCGTCAGG GTATCGAAAG CGATACTCAA
TATGGTGCCG TTGTGCCACC GATTTATTTG TCGACTAATT ACGCCTTCGA TGGTCATAAC
AATCCCCGCG AATTCGATTA CAGTCGTTCA GGTAACCCAA CGCGCTGTAT TTTAGGCGAA
GCGTTAGCCC AATTAGAAAA GGGCGCGACT GGTATAGTAA CTTGCACTGG CATGGCGGCC
ATCACCTTAG TGACCACCTT ACTCGGCCCA GATGATCTCT TGGTTGTGCC CCATGATTGT
TACGGTGGTT CTTACCGTTT ATTTACCAAT TTAGCGAAGA AAGGCCAGTT TAAGCTGCTG
GTGGTCGATC AAACCGACAG TCAAGCGTTA GCCGCAGCCA TAGCGCAGAA TCCTAAGATG
GTGTGGCTCG AAACCCCATC GAACCCATTA TTGCGTGTGG TGGATATCGA AGCCATTGCT
AAGGCGAGCC ATGATGTCGG CGCGCTGGTG GTGGTCGATA ACACCTTTTT ATCGCCGATA
TTGCAACAAC CCCTATTGTT AGGTGCGGAT ATCGTTATCC ATTCCACCAC TAAATATATC
AATGGTCACA GCGATGTGGT CGGCGGCGCT GTGGTCGCCA AAGATGCGCA AATCGGCGAA
AGCTTACATT GGTGGTCGAA CACTCTAGGC TTAACGGGGT CAGCCTTCGA CAGTTATCTG
ACCCTGCGCG GCCTACGTAC TCTAGCGGTA CGCATTCGCG AACATCAAGC CAATGCCCTG
CGCATTGTTG AGGTATTAAC CCAAAGCCCT GTGGTGAGCA AAGTCTATTA CCCCGGTCTT
GCGGATCACC CTGGTCACGC CATTGCGGCC AAGCAGCAAA AAGGCTTTGG CGCTATGCTG
AGCTTTGAGC TCAAAGGCGG CGAGACCGAA GTGGTGGCCT TTTTAGGTGC ATTAAGTTTA
TTTAGCGTGG CAGAAAGTTT AGGTGGCGTC GAAAGTTTGG TGGCAGTGCC CGCCACTATG
ACCCACAGAG CCATGGAGCC GCAGGCGCGC TTCGAGGCTG GTATTAAAGA CACCCTATTG
CGTCTATCGG TGGGTATTGA AGATGCCGCC GATTTAGTTG CAGATATTCA AGCAGGATTA
GCCGCCGTTG CGGCTTGTCA GTAG
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| Protein sequence | MAERQLATLA VRQGIESDTQ YGAVVPPIYL STNYAFDGHN NPREFDYSRS GNPTRCILGE
ALAQLEKGAT GIVTCTGMAA ITLVTTLLGP DDLLVVPHDC YGGSYRLFTN LAKKGQFKLL
VVDQTDSQAL AAAIAQNPKM VWLETPSNPL LRVVDIEAIA KASHDVGALV VVDNTFLSPI
LQQPLLLGAD IVIHSTTKYI NGHSDVVGGA VVAKDAQIGE SLHWWSNTLG LTGSAFDSYL
TLRGLRTLAV RIREHQANAL RIVEVLTQSP VVSKVYYPGL ADHPGHAIAA KQQKGFGAML
SFELKGGETE VVAFLGALSL FSVAESLGGV ESLVAVPATM THRAMEPQAR FEAGIKDTLL
RLSVGIEDAA DLVADIQAGL AAVAACQ
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