Gene Sputcn32_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0604 
Symbol 
ID5080642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp666155 
End bp666733 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content39% 
IMG OID640497731 
ProductOmpA domain-containing protein 
Protein accessionYP_001182135 
Protein GI146291711 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.303363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA ACATTATTAC TTTAGCGGCC ATTATTTCCT TAGTGTCTTT TAGTACATAT 
TCTCATGCCA ATAGTTCTAA CAACATCGAT GTTGCACAAA ATGGCATCTA TGTAGGCGCT 
AACTATGGGT ATTTAAAGGT CGATGGAGCC GACGATTTTG ATGATAACAG CGATGTTTTT 
CAAGGTCTTG TTGGTTATCG TTTCAACCAG TACTTAGCCC TTGAAGGTGG ATACATTAAC 
TTTGGCAAGT ATGGCAACAA CTTAGCTAAG GCCGAAACGG ATGGTTATAC TGCAGGCCTT 
AAAGTCATGT TTCCAATTGT AGACAGAGTC GAGTTATACG CTAAAGCTGG GCAGCTATGG 
TATTCCACCG ATTATAAAGT CGTAGGCTTT TCTGGAAATA AAGATGATGA AGGTGTATTT 
GCGGGTGCAG GTGTCGCATT TAAAGTCACA GACCGATTTT TAATTAATGC TGAGTACACT 
TGGTATGATG CAGAGATTAA TGCGGATAAT GTAGCTAATG GTGCAAATAC AGAAACGGAC 
TTTAAACAAG CAAGTTTAGG TGTTGAATAT CGATTCTAA
 
Protein sequence
MKNNIITLAA IISLVSFSTY SHANSSNNID VAQNGIYVGA NYGYLKVDGA DDFDDNSDVF 
QGLVGYRFNQ YLALEGGYIN FGKYGNNLAK AETDGYTAGL KVMFPIVDRV ELYAKAGQLW 
YSTDYKVVGF SGNKDDEGVF AGAGVAFKVT DRFLINAEYT WYDAEINADN VANGANTETD 
FKQASLGVEY RF