| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0601 |
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| Symbol | |
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| ID | 5080639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 661690 |
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| End bp | 662466 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640497728 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001182132 |
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| Protein GI | 146291708 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTC CCGCTCGAAT AAAGCAACAA ACTTGCATGG ATTGCTTAAG TGGTAAGTCA
TTAGGCTTTG AAATCCGAAT GGCATTTCAA CCTATTATCC ATTGGCCTAG TCGTGAAATT
AGCGGTTATG AAGCCCTTGT TCGAGGCCCA AATGGAGAAG GTGCTGCGTG GGTGTTTGAG
CGGATTAATG AAGATAATAA ATACTATTTT GATCAGGCTT GCCGTGTTAA AGCGATAGAA
ACCGCTTCAA AGCTGGGACT CGATAAAATG CTCAGCATCA ACTTTTTACC TAATGCCGTA
TATAACCCTG AGACCTGTAT CCGCGCGACG ATTGAAGCTG CAGATCTTTA TGGTTTTGAT
ATTCATAAAA TCATGTTTGA AATGACTGAG GGCGAGCAAA TTGTCGATCG GGCAAAATTA
ATGCGTATTT TCGAGAGCTA TGCTAAGCGT GGCTTTATCA CGGCAATCGA TGATTTTGGC
AGTGGCTTTG CCGATTTAAG CTGGCTCGAA GCTCTTCGTC CCCAAGTATT AAAACTCGAT
ATGACCTTGA TCCGAGATAT CGATCTAGAT AAAGAAAAGC AGTTAGCCGT GGATGAAATA
CTGCGTATTT GTTTAGAGCT TAATACAAGA GTTTTGGCTG AAGGCATTGA GACTGAAGCC
GAACTTAATT ATCTCGCTGG AATAGGGATT GAGTATTTTC AGGGTTATTA TTTTGCCAAA
CCACAACTCG AATATTTGAG TTCCTTTGAA GATCTGAGCT TTCACGCCCC AAAGTAA
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| Protein sequence | MDFPARIKQQ TCMDCLSGKS LGFEIRMAFQ PIIHWPSREI SGYEALVRGP NGEGAAWVFE
RINEDNKYYF DQACRVKAIE TASKLGLDKM LSINFLPNAV YNPETCIRAT IEAADLYGFD
IHKIMFEMTE GEQIVDRAKL MRIFESYAKR GFITAIDDFG SGFADLSWLE ALRPQVLKLD
MTLIRDIDLD KEKQLAVDEI LRICLELNTR VLAEGIETEA ELNYLAGIGI EYFQGYYFAK
PQLEYLSSFE DLSFHAPK
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