| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0582 |
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| Symbol | |
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| ID | 5080620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 635694 |
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| End bp | 637088 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497709 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001182113 |
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| Protein GI | 146291689 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAT CACGAGTGGC TTGGCTGTGT TTACTGTCAG TGCCTTTTTT ATTGCCATCG
GCTTTGCATG CAGAGCCGAT AAGCTTCAGT GACGCTTGGC AACAAGTGCT GAAGGTGAGC
GATAAGCTAC AGGCGCAGTC GCAGGAAGTT AACCGTGCTA AAGGCGAGCA GCAGGCCGGA
GAGGGGTTAA ACTTACCCTC CTTAGATATT CGCGGTAACT ATATTCATTT GGATAAACCG
ATAGAGTTTG ATTTGAAAGA ATTAAATTCA GTGGTTTCTA TTCCACCAGC CCTTGGCGGC
ATCATCGCGG GTATTCCGCC ACTGCCCTTA AGTGAGCAAG ATATTTTTAG TGCGAGCTTG
CAGGCAATGT GGCCGATTTA TACGGGTGGG CAGATCACGG CCGCTCAAGG TATACACGCG
GCCATGGTGG CCGAAAAACA ACAAGAATTA CAATTAGCCA CCCGCGATTT ATTTACCCAG
TTGGTGGACA GATATTATGC TGTCGATGTG ACTCAGGCAT TAGTTGAGAC CCAAACCGAT
CTGGTTGGCT CCTTAACAAA GCATGTTGAA CATGCTCTAG CAATGGAGCG CGAAGGGCAA
ATTGCGAAGG TTGAGCGCCT CAATGCTCAG GTCGCTTTAG ATAATGCTAA AGTCAATTTA
GGTAGTGCCC GCCGCCAACA TGAAATGGCT GTTATCGCGC TGGCTCGTAT GCTCCAGCAA
AGTCAGGTGA GTACCCATTC CTCTTTATTC GTACTGCCGC ACGCTCCATC GTTAGATCAA
CTTAGCCAAA TGACCTTAAG CCAACATCCA GCACTCAAAT TGCTCGAAGC GAAAGAAGCG
CAAGCGAATG GTTTAGTATC ATTAGAAAAG GGGAAATACC ACCCAACGGT ATTCCTCTTT
GGTAATTACA CCTTGTATGA AGAAGATACA CTCTTATCGA GCATTACGCC TGATTGGATG
GTTGGTGTCG GGGTTAATGT GCCGCTGATC AGCCGTGATG GCCGCAGCGG TAAGGTCGAA
GCAGCGAAAA GTGCCCTACT GCAAGCCCGC TATACCAAGG CACAAACCAA GCAAGACTTA
AGCCTGCTGG TGGATCAAAG CTATCGCCAA TTATTACAGG CCGAAGAAGA AGTGAAGGCG
CTTGATACCT CACTCGAGCT TGCGACCGAA AATCTGCGGC TTAGGGAGAT TGCTTTTAAT
CAAGGGCTTT CCACTTCTAT CGACCGAGTC GATGCCGAGC TAAAACTGAG CGCAGTGAAA
ACCCAGCAAT TGGCTGCCCG TTATCGTTAT GTGCAAGCCT ATGCCAGATT GATGGCAATC
AGTGGTCAAT TAGATGAATT TATTGGTCGT ACCGTCGATC GTCACCCAGT GCAGGAGATA
AATCATGCGC GCTAA
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| Protein sequence | MKRSRVAWLC LLSVPFLLPS ALHAEPISFS DAWQQVLKVS DKLQAQSQEV NRAKGEQQAG
EGLNLPSLDI RGNYIHLDKP IEFDLKELNS VVSIPPALGG IIAGIPPLPL SEQDIFSASL
QAMWPIYTGG QITAAQGIHA AMVAEKQQEL QLATRDLFTQ LVDRYYAVDV TQALVETQTD
LVGSLTKHVE HALAMEREGQ IAKVERLNAQ VALDNAKVNL GSARRQHEMA VIALARMLQQ
SQVSTHSSLF VLPHAPSLDQ LSQMTLSQHP ALKLLEAKEA QANGLVSLEK GKYHPTVFLF
GNYTLYEEDT LLSSITPDWM VGVGVNVPLI SRDGRSGKVE AAKSALLQAR YTKAQTKQDL
SLLVDQSYRQ LLQAEEEVKA LDTSLELATE NLRLREIAFN QGLSTSIDRV DAELKLSAVK
TQQLAARYRY VQAYARLMAI SGQLDEFIGR TVDRHPVQEI NHAR
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