Gene Sputcn32_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0575 
Symbol 
ID5080613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp625307 
End bp626311 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content49% 
IMG OID640497702 
Productrod shape-determining protein MreC 
Protein accessionYP_001182106 
Protein GI146291682 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000194769 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCAA TTTTTGTTCG TGGTATTTCT AACCAATTTC GTTTAACACT GGCAATTATT 
TTGTCGGTGA TTTTGCTCGT GGCTAATCAT CGTCTCGAAC CTGCGCGTCA ATCCCTTTCA 
TCTGTATTAA GCCCTGTGCA ATATCTCGCC AGTTTTCCCG GGGCCTTACT CGATTGGTCA 
TCCGAGAGTT TTGCAACGCG TAATATGCTG GCGTTACAGA ATAAAGAGCT ATTAAGACAG 
CAATTACTAA TGAGCGAGCG TTTGCAGCGT TTTGAACATT TGCGCCAAGA GAATGAGCGT 
TTACGCGCCT TGCTTGGGTC TCCTGCGTAT CAGGATTCTC GCAAAATGGT GGCAGAAGTG 
CTCGAGGTCG CTAGCGATCC CTCCCATCAT TATGTTGTGT TAAATCACGG AGCGCGCAGT 
GGCGTTTTCG TCGGGCAACC CGTTGTTGAT GCACAAGGGG TTGTGGGGCA GGTGGTGCAA 
ATTAGCGAGA TGACCAGTCG TGTATTGCTG CTTTCTGATG TTTCCCATGG TTTACCTGTG 
CGTATTACCC GCAACGATGT GCGCTTAATC GCCAATGGTA CGGGTGAAAA TGATGAGATT 
GAATTGCGCC ATGTGGCTAA AAGTATCGAT GTGCGTGTTG GTGATTTATT AGTGACTTCT 
GGCCTTGGTA ATCGTTTTCC CGAAGGGTAT CCCGTTGCTC GGGTCATGGA AGTCCTGACG 
GAGGATGGCC AAAGCTATGC CCGTGTTACC GCTCAACCAC TGGCAGCCCT TGATCGTATT 
CGTTATTTAT TATTGATTTG GCCATCATCA GATTCAGGTG TGACTTTGCC GCATCAAATG 
CCAGTACCTG CTGCGGATCA GCCTGAAGAG GCTAAGCCGG ATCCCAATAC GATAAATAGT 
GCACCCAATA CCCAAGGTTC GGCAAACACG CCACAAGGGG CTGCAACTAA TGCGAATGCT 
ACAACGGGCG CTGTGACCAC TCCACCGCCA GCAGAGGTGC ATTAA
 
Protein sequence
MKPIFVRGIS NQFRLTLAII LSVILLVANH RLEPARQSLS SVLSPVQYLA SFPGALLDWS 
SESFATRNML ALQNKELLRQ QLLMSERLQR FEHLRQENER LRALLGSPAY QDSRKMVAEV 
LEVASDPSHH YVVLNHGARS GVFVGQPVVD AQGVVGQVVQ ISEMTSRVLL LSDVSHGLPV 
RITRNDVRLI ANGTGENDEI ELRHVAKSID VRVGDLLVTS GLGNRFPEGY PVARVMEVLT 
EDGQSYARVT AQPLAALDRI RYLLLIWPSS DSGVTLPHQM PVPAADQPEE AKPDPNTINS 
APNTQGSANT PQGAATNANA TTGAVTTPPP AEVH