| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0573 |
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| Symbol | |
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| ID | 5080611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 620094 |
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| End bp | 623870 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497700 |
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| Product | MSHA biogenesis protein MshQ |
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| Protein accession | YP_001182104 |
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| Protein GI | 146291680 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0117136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTTAGAT TTTTGATGAT ATTAAACTTG GCACTACGTT ATCAAACTCA TTATATGCGT
GGCTTATTGT CTAACTTGCT GCTTATATTT TTTATTCTTA CCTCATCGCC AACTTATGCC
GCAATTGATT GCAATAGTGT ATTTCCGGGG CCAATACAGA GTTTTAGTAG TACCGGCGAA
CTCTATATGC AAAGCGGTGC ACTCATTGAA AATTATAATG TTTTAGATGT TTGCTTTAAA
ACGGTAAAAA ATTACCATGA AATGAATGTA AATGCTTGTG GTATAGGGAA GTGTCAGATT
TCGGGGACTG CCAGTTTGGC AAGGGCAGCA CCCACTTTTG TCAATAGCTC TACTTCTGCA
ACCAATATTG TAGCCAATTG GACAACGCCC TCTGTAGAGC TTGGAACGAC AGCGGGTTAT
GGTCAACGAT TTAATAGTAG TCGTTGGGAT ATAGGCACAT TAACGATTAA TACAGGCGGT
AATGTCACCG TATCTGATGC TTATTCAACA TATGTCATAA AAGATCTGAC TTTTTTTAAC
TCAAGTATTA TGACGTTAAA AGCAGGTAAA ACTTATATTA TTGATGGCGA TCTTAACCTT
AATTCAGGTA CGTTAAATAT AGTGGGTACA GGCGATACTA AACTGTATAT TAAAGGTAAT
TTTACCATTG CACTCTCATC AGTTTTTAAT GCGCCCACTT CTGTTGATGT ATACGTAGGT
AATAGGCTAG AAGTACAAAG TAATGCTCAG ATTCAAGGTA GTTACTATGT CGCCGATGAT
GCGACGTTAC TCAATAGCGC AGTATTGGTA GGTAGGCTCA GTGCTAAAAA CGTAACTCTT
CAGAGCAATA GTAAGGTGAT TTATGATGCC GGTGCACCTG TCTTACAATG CTTTAATGAT
ACTTTCTCCC AAAGCGCATT AAGCAGTGAT TGGGTTGTTT CCCGTAGCAG TGGCAGTTTT
ACCCCTTCAA TCGTGGGTGG CCGCATGCGT TTAACGCAAG CGAGTCAGAA ACAATCAACG
GCATCCACTT ATCAAAGACT TTTCCCCGCC GCTGAAAACT TAGTCGAAAT CCAGTTTGAT
CATTATGCTT ACGGTGGCGC GACCAATAAT GGTGCCGATG GTATTGCCGT AGTGTTATCT
GATGCCGCGA TTACACCGCA GCCTGGCGCC TTTGGAGGAC CTTTAGGTTA TGGTTTTAAG
CCTGGAATTA GCGGGTTTGC GGGAGGCTGG CTTGGGGTTG GTATTGATGA GTTTGGGAAC
TTCTCTGGTG AAGGCGGGAG CATAAATCTT TCGGGCCAGC GGCGCCAGTC AGTTGTCGTG
CGTGGTTCTG GTGCTGGCAC ATCTGGTTAT CGTTATCTGC GTGGAACCTG TAATAACGGC
ACAACCAATA CCAGTGGTAG CTGTTTATCT CCTACGGTTG ATAAAAACAA TGTAACCCCT
GCACACAGAT ATAAAATTAC CATAGATTCG CAGTCTGCGG GACAATCATT AGTCAAAGTT
GAGCGTAATA CAGGCTCAGG TTTTGTCACC TTAATATCCT CTTTCAATGC TGCGGCTCAG
ACGGGGCAAG CAACCATTCC GAAGGATTTT TTATTGTCAT TAACGGGATC GACGGGGGAT
TACTATAATA ACCATGAAAT TGATAATGTT CAGATTTGCG CATTAAAGTC GAATCCCATT
ACCACACAGA TCGATCATTT TGAATTTGAT CATACGGGAC AGGGACTCAC CTGTAATCCC
GAGACTGTGA CCATTAGAGC CTGTGCCAAT ACGAGTTGTA GTCAACTCTT TACCGAACCG
CTAACGGCAA CATTATTGCC TGAGTCTACA GCCGAGGGTG TGTGGGTTGG CGGTAACCAA
GTGAGTTTTA GTGGTGGTAC TGCGCAATTA CAACTACGGC GCAATACTGC TGGCGTTGTG
ACCTTAGGTG TAAAAGGGTC CAGTCCAACA ACTAGGCCCT TAAGCAAGAC CTTATGCCGT
ATTGGTGCTG GTGCATTAAG TGAAAATAAT TGTTCGCTGA CCTTTGCCGA TAGCGGTTTT
ATTTTTGATG TACCTGATAA ATTAGCTAAT AAACCGGTTG AGGTGTTGGT CAAAGCGGTT
AAAAAGTCGG ATGTCACACA GCAGTGTATT CCGAGTTTCC AGAATCAGGC TAAGAGCCTT
AGTTTTTGGA GTCAGTATGT GGAGCCTAGT GCGCCAATCA CACCTAAGGC TGTCACTATT
AATAGCACTG CAATCAGTGC TGCGAGCGCC GTACCTACTG CATTGAGCCT GGGCTTTGAT
ATTAATGGGC AGGCAAAAAT CACGGTCAAT TACCCCGATG CGGGCAAATT ACAGCTCAAT
GCCCAATATA CAGGAAACGG TACTGAGCAG GGCCTTGTGA TGACTGGCTC GGATCAATTT
GTCAGTGTCC CAGCAGGATT ATGTGTGAAA CCCGTAAATG CAACTGCGGT TTGCCCAAGT
GCTAATATGA GTTGCAATGT CTATCGTAAA GCGGGTCAAA CCTTTGGTAT GACGGTGCAG
GCGGTTGCGT GGCAGGCGGA CAATGATAGC GATTTTTGCA GTGGTAACCT GCCAACGCCC
AACTTTAGTG ATGATTCAAT GATGCTGGCA AGTAAAGTGG TTGCGCCAAC CATAGCCAGT
GGCGCAAACA ATGGTGTGTT AGGCGTAACG TCTTACAGCC ATAGCGCGCA AACCAACAAC
TTAAACACCA TCAATAATCA AACAATCAGC GAGGTTGGCG TATTTCAAAT TTCAGCTACG
GCCAGTGCTA ATTACCTCGG CACTTCGACT AGTTTAAATA TCCCTACCGC CTATTCTGCC
AATATTGGCC GCTTTGTGCC CGACAGGTTT TTGATTGGGG ATATTTCGGT CTTACCTGCC
TGTGGTGGCT TTAGCTATAT GGATCAACCC TTCCCCATGT CGATGAGTAT TAAAGCCTTA
AATATTGGTG GCACGATTAC GCAAAACTAC TTCCCACCAT TTTCCTTTGC GACGGCCAAA
TTAGTGGGTG AGAACAATAA TAACGGGGTT GATTTACAGA ATCGCTTAAG TGCCTTGCCA
ATCAAGGCTG ACAGTTGGAG CCAAGGTATG GCGACGGTGG ATGGCAGTTT CCGTGCGAAT
GTTAATCGGG TGACACCAAA TATGGCTGCC AATTTATATG AGGATGGCCC CTTCGAATTG
CTCGATATTG GCGTGCAGGT ATCAGATAAC GATCCTCATC CCAATGGGAT TTTCAGCTAT
GTAGCCTCAC CTGATATGGA TGCGGCATCC ACAGGTGCCT GCACCAATTG CAATGCAAAA
AAAATCACCA CGCAGATCCT ACGCCATGGT CGTGTTGTGA TGGATAACAC CTATGGTCCA
GAGACTGAAG TCCTCAAAAT GCCGACCAGA GCCGAGTATT GGAATGGCAC GAATTGGGTG
TTAAATGGGG ATGATAGCTG CACTATCGCC ACTTATGGCT TAGGTTCGCA GGTTGATAAT
GCTGGTCTTG GCTATCACTT TGACCCAAAT TTAGCCACTG GACAAAGTGT TGTGCGCTCC
GGTGGCACAT CAACATTCCA ATCTGGCCAA TTTGAGTTGC TGTGGCGAGC CGTGGCGACA
AGTGGCCCGC TTTACCGAGG ACAAGTGACC GCACCTTTAG ATGTACCCGC TTGGCTAGAA
TGGTATTGGA ATTGGAACGG GGTTTCACCT ACTAGCTTAT CCGAACCCCG TGCCAGTGCA
TTTTTTGGTC GTTACCGTGG ACATGACAGG ATCATCTACT GGCGAGAGGT TAATTAA
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| Protein sequence | MVRFLMILNL ALRYQTHYMR GLLSNLLLIF FILTSSPTYA AIDCNSVFPG PIQSFSSTGE
LYMQSGALIE NYNVLDVCFK TVKNYHEMNV NACGIGKCQI SGTASLARAA PTFVNSSTSA
TNIVANWTTP SVELGTTAGY GQRFNSSRWD IGTLTINTGG NVTVSDAYST YVIKDLTFFN
SSIMTLKAGK TYIIDGDLNL NSGTLNIVGT GDTKLYIKGN FTIALSSVFN APTSVDVYVG
NRLEVQSNAQ IQGSYYVADD ATLLNSAVLV GRLSAKNVTL QSNSKVIYDA GAPVLQCFND
TFSQSALSSD WVVSRSSGSF TPSIVGGRMR LTQASQKQST ASTYQRLFPA AENLVEIQFD
HYAYGGATNN GADGIAVVLS DAAITPQPGA FGGPLGYGFK PGISGFAGGW LGVGIDEFGN
FSGEGGSINL SGQRRQSVVV RGSGAGTSGY RYLRGTCNNG TTNTSGSCLS PTVDKNNVTP
AHRYKITIDS QSAGQSLVKV ERNTGSGFVT LISSFNAAAQ TGQATIPKDF LLSLTGSTGD
YYNNHEIDNV QICALKSNPI TTQIDHFEFD HTGQGLTCNP ETVTIRACAN TSCSQLFTEP
LTATLLPEST AEGVWVGGNQ VSFSGGTAQL QLRRNTAGVV TLGVKGSSPT TRPLSKTLCR
IGAGALSENN CSLTFADSGF IFDVPDKLAN KPVEVLVKAV KKSDVTQQCI PSFQNQAKSL
SFWSQYVEPS APITPKAVTI NSTAISAASA VPTALSLGFD INGQAKITVN YPDAGKLQLN
AQYTGNGTEQ GLVMTGSDQF VSVPAGLCVK PVNATAVCPS ANMSCNVYRK AGQTFGMTVQ
AVAWQADNDS DFCSGNLPTP NFSDDSMMLA SKVVAPTIAS GANNGVLGVT SYSHSAQTNN
LNTINNQTIS EVGVFQISAT ASANYLGTST SLNIPTAYSA NIGRFVPDRF LIGDISVLPA
CGGFSYMDQP FPMSMSIKAL NIGGTITQNY FPPFSFATAK LVGENNNNGV DLQNRLSALP
IKADSWSQGM ATVDGSFRAN VNRVTPNMAA NLYEDGPFEL LDIGVQVSDN DPHPNGIFSY
VASPDMDAAS TGACTNCNAK KITTQILRHG RVVMDNTYGP ETEVLKMPTR AEYWNGTNWV
LNGDDSCTIA TYGLGSQVDN AGLGYHFDPN LATGQSVVRS GGTSTFQSGQ FELLWRAVAT
SGPLYRGQVT APLDVPAWLE WYWNWNGVSP TSLSEPRASA FFGRYRGHDR IIYWREVN
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