| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0566 |
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| Symbol | |
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| ID | 5080604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 615843 |
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| End bp | 616460 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497693 |
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| Product | MSHA pilin protein MshB |
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| Protein accession | YP_001182097 |
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| Protein GI | 146291673 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.571105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTA AGCAAAATGG TTTTTCATTG ATTGAACTCG TTATCGTTAT TGTGATTTTA
GGCTTATTAG CGGCAACGGC GATCCCACGT TTTTTAAATG TAACCGACGA CGCACAGGAT
GCGAGTGTCG ATGGGGTTGC GGGTGGTTTA TCCACTGCGG TGAGCTTTGT ACGTTCACAG
TGGGAAGTGG ATGGACGTCG CAATAATAAT GTGCTCCTCG ATGGTACCTC GGTTAACCTC
GATACTCGTT TTGGTTACCC TACTGGAACC TCAGTCACGG ATGCGACCGC AATGACGGAT
GCCAGTTGCC AAGAAGTCTT TAATACCGTG TTGCAGAGTG CTCCACCCAA TGTGCTTTAC
ACTCAAGATA CCCGTAATCA ACGCTATACC GTCAGAGTGA TCGATGGTGC GGGCGGCAGT
GCGACCTCAA TTGCAGGCGC AACGGTAACT GGCTTAGATT TATGTGTTTA TCACCAAGTG
GCTTCACTGG TGGTCAACCA AACAACGGGG GTCGCGACGC CTACACCCGA TTTATCCACG
GCAGGTGCTA AGGGCGTGGT CTATAACCCA GGTACAGGCA GAGTATTAAG CTTTACCCAA
ACCCCATTTA CGCCTTAA
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| Protein sequence | MKTKQNGFSL IELVIVIVIL GLLAATAIPR FLNVTDDAQD ASVDGVAGGL STAVSFVRSQ
WEVDGRRNNN VLLDGTSVNL DTRFGYPTGT SVTDATAMTD ASCQEVFNTV LQSAPPNVLY
TQDTRNQRYT VRVIDGAGGS ATSIAGATVT GLDLCVYHQV ASLVVNQTTG VATPTPDLST
AGAKGVVYNP GTGRVLSFTQ TPFTP
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