| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0564 |
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| Symbol | |
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| ID | 5080602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 614008 |
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| End bp | 615228 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497691 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001182095 |
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| Protein GI | 146291671 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTTT ATCAATACCG TGGTCGCAGT GGTCAAGGCC AAGCCGTTAC GGGACAGCTC
GATGCTGCCT CGGAAAGTGC GGCGGCGGAT ATGCTCTTAG CCCGCGGGAT TATTCCCCTT
GAAGTGAAAG TGGCTAAAGT CGTTAAGTCC TTTTCTGTGA CTCAGTTATT TGGCGGTAAA
GTCGGTTTAG ACGAGTTACA AATTTTCACT CGCCAAATGT ACTCTTTGAC TCGTTCAGGC
ATTCCTATTT TACGGGCGAT TGCAGGATTA TCTGAAACCG CCCATTCTCA GCGGATGAAA
GATGCCCTCA ATGATATTTC TGAGCAACTT ACCGCTGGGC GGCCCTTGTC CTCTGCGATG
AATCAACACC CTGAGGTGTT TGATTCTTTG TTTGTTTCTA TGGTACATGT GGGTGAAAAC
ACCGGTAAGT TAGAGGATGC ATTTATCCAG CTTTCAGGCT ATATCGAACG TGAGCAAGAG
ACGAGACGTC GAATTAAAGC CGCCATGCGT TACCCCATAT TTGTATTAAT CGCCATTACC
ATTGCCATGG TGATCTTGAA TATTATGGTG ATCCCTAAGT TTGCTGAAAT GTTTAGTCGC
TTTGGTGCCG ATTTGCCTTG GGCGACCAAA GTGTTAATTG GTACTTCAAA CCTTTTTGTT
AATTATTGGC CCTTAATGCT GGTGGCGCTT ATCGGAGCCA TTGTTGGGAT ACGTTATTGG
CATCATACGG AAAAAGGTGA AAAGCAGTGG GATAAGTGGA AGCTGCATAT TCCAGCCGTT
GGCTCTATTA TTGAGCGTTC AACCCTTTCA CGTTATTGCC GCAGTTTTTC GATGATGCTC
AGCGCGGGAG TCCCTATGAC TCAAGCATTA AGTCTGGTGG CTGATGCGGT GGATAATGCC
TATATGCACG ATAGGATTGT GGGCATGCGC CGAGGGATTG AATCCGGTGA CTCAGTGCTT
AGGGTATCGA ATCAGAGCCA GTTATTTACC CCCTTAGTGC TACAAATGGT GGCGGTAGGT
GAAGAAACCG GGCAAATCGA TCAGTTATTG AATGATGCTG CCGATTTTTA TGAGGGTGAA
GTGGATTACG ATCTTAAAAA TCTCACGGCA AAATTAGAGC CTATTCTTAT TGGCATAGTC
GCCGTTATCG TATTAGTGCT TGCGCTCGGT ATCTATCTCC CTATGTGGGA TATGCTCAAT
GTGGTTAAGG GGGGGAATTA A
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| Protein sequence | MPVYQYRGRS GQGQAVTGQL DAASESAAAD MLLARGIIPL EVKVAKVVKS FSVTQLFGGK
VGLDELQIFT RQMYSLTRSG IPILRAIAGL SETAHSQRMK DALNDISEQL TAGRPLSSAM
NQHPEVFDSL FVSMVHVGEN TGKLEDAFIQ LSGYIEREQE TRRRIKAAMR YPIFVLIAIT
IAMVILNIMV IPKFAEMFSR FGADLPWATK VLIGTSNLFV NYWPLMLVAL IGAIVGIRYW
HHTEKGEKQW DKWKLHIPAV GSIIERSTLS RYCRSFSMML SAGVPMTQAL SLVADAVDNA
YMHDRIVGMR RGIESGDSVL RVSNQSQLFT PLVLQMVAVG EETGQIDQLL NDAADFYEGE
VDYDLKNLTA KLEPILIGIV AVIVLVLALG IYLPMWDMLN VVKGGN
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