| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0561 |
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| Symbol | |
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| ID | 5080599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 610135 |
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| End bp | 611061 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640497688 |
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| Product | MSHA biogenesis protein MshM |
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| Protein accession | YP_001182092 |
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| Protein GI | 146291668 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTGA AGCATTTTGG CCTAAGCCAG ACCCCATTTT CACTCACCCC GAATACCGGA
TTTTTTTTCG GGCTATCGCC ACATGTGGAA GCCTTGCAAG TGCTCCAAAC GGCCTTGCAA
ACGGGTGAGG GGTTTATCAA GGTGACAGGT GAGGTCGGTA CAGGTAAAAC ATTACTTTGC
CGTAAGTTAA TTAATGACCT ACCGAGTGGA TTTCATTGTG CTTATTTGCC TAATCCCTAT
TTAACGCCAG CGGAATTACG TTGGGCGGTA GCAAATGAAT TGGGGCTTCA TTACGCGAAA
GATATCGATC AGCAGCAGCT TACAGGCTTG ATTCAGCTGC AACTGCTCGA GTTAAGCCGT
CATGGGCAGG CGATAGTTTT AGTGTTAGAC GAGGCGCAGG CATTACCGGA CGATAGCTTA
GAAGCGCTGC GTTTATTCAC CAACCTTGAG ACCGAGAGTC GCAAATTACT CCAAGTCGTG
TTATTTGGGC AGCCAGAGCT TGATGAAAGA TTAAAACGTC AAGAATTTAG ACAGTTAAGG
CAGCGCATCA CTTTTAGCTA CAATTTACGC CCGCTCACAT GGGATGAAAC CGATGCCTAT
ATTCGCTATC GATTAGCCAT TGCGGGTCGC CAAGGTGAAG CCTTATTTAC ACCTAAACTA
ACGCGTAAGA TTGCCAATGC CTCCCGAGGG ATCCCCAGAT TGATTAATAT TCTCGCCCAC
AAGGCGCTAT TGCTAAGTTT TGGTGAAGGC GTTACACGGG TGAAGGCATC CCATGTGCGT
GATGCTATTT TAGATACTGA AGATGCCAGT AAAAATTCGT TCTGGTCTCG AAGCATGGCG
CTCGTTCTAG CGCTATTAAC GGTCTTCATT TTTGCGATAG CAGCATCAGG TATCGATTTC
CTGCAGATTT TGGGGAATAG AGCATGA
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| Protein sequence | MYLKHFGLSQ TPFSLTPNTG FFFGLSPHVE ALQVLQTALQ TGEGFIKVTG EVGTGKTLLC
RKLINDLPSG FHCAYLPNPY LTPAELRWAV ANELGLHYAK DIDQQQLTGL IQLQLLELSR
HGQAIVLVLD EAQALPDDSL EALRLFTNLE TESRKLLQVV LFGQPELDER LKRQEFRQLR
QRITFSYNLR PLTWDETDAY IRYRLAIAGR QGEALFTPKL TRKIANASRG IPRLINILAH
KALLLSFGEG VTRVKASHVR DAILDTEDAS KNSFWSRSMA LVLALLTVFI FAIAASGIDF
LQILGNRA
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