| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0546 |
|---|
| Symbol | |
|---|
| ID | 5078072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 593237 |
|---|
| End bp | 594172 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640497673 |
|---|
| Product | band 7 protein |
|---|
| Protein accession | YP_001182077 |
|---|
| Protein GI | 146291653 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000115645 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCTGT TTACCTTAAT TATTTTATTT GTTTTATTTA TTCTCTACAA ACTAATGCTA
ATAGTGCCAA TGCGTGAAGT TCACGTTATT GAGCGATTAG GGAAGTTTCG TACCGTATTG
CAGCCGGGTT TTCATTTTCT AATCCCGTTT TTTGACCGTG TCGCCTATCG TCACGATACC
CGTGAGCAAG TACTTGATGT GCCACCACAA AGTTGTATTT CTAAGGATAA TACTCAGCTT
GAGGTGGATG GTCTTGTTTA TCTTAAGGTA ATGGATGGAA AACTGGCGAG TTATGGTATT
GAAAACTACC GTAAAGCAGC GGTAAACCTC GCTCAGACAA CGATGCGTTC TGAAATTGGT
AAGTTAACCT TAAGTGAAAC TTTTTCTGAG CGTGATAGTT TGAATGAATC CATAGTACGC
GAGATTGATA AGGCTTCTGA GCCTTGGGGG ATCAAAGTAT TACGTTATGA AATTCGTAAT
ATTACCCCAT CACGCCATGT GATCCATACC CTAGAAAAGC AAATGGAAGC CGAGCGTCGC
AAACGCGCTG AAATCACCTT AGCCAATGCG GAAAAAGCGG CAATGATCAA TATGTCCGAA
GGTGAGCGTC AAGAGGCCAT CAACCTTTCT GAAGGGCAAA AACAGAAACG GATTAATGAA
GCCAAAGGTA CGGGACAGGA GATTGCTATC ATTGCTAAGG CGAAATCGGA GGGGATGGCA
ATGATCTCTC AAGCATTAGC GGTTAATGGT GGTACTGATG CGATGAATAT GTTGTTAAAA
GAGCAGTTTA TCGCTCAAGT TGGCAAGATA CTTAATGATG CACAAGTATC GGTAGTCCCC
GCCGAAATGG CGAAGCTCGA AGGTTTCTTC GAGGGCATGG AGCAGGTCAC TCACACTATG
AGTGGTCAAA ATACAGTAAG TAAAGGAGCG CGTTAA
|
|---|
| Protein sequence | MFLFTLIILF VLFILYKLML IVPMREVHVI ERLGKFRTVL QPGFHFLIPF FDRVAYRHDT
REQVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI ENYRKAAVNL AQTTMRSEIG
KLTLSETFSE RDSLNESIVR EIDKASEPWG IKVLRYEIRN ITPSRHVIHT LEKQMEAERR
KRAEITLANA EKAAMINMSE GERQEAINLS EGQKQKRINE AKGTGQEIAI IAKAKSEGMA
MISQALAVNG GTDAMNMLLK EQFIAQVGKI LNDAQVSVVP AEMAKLEGFF EGMEQVTHTM
SGQNTVSKGA R
|
|---|
| |