| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0539 |
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| Symbol | |
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| ID | 5078065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 586850 |
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| End bp | 587686 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640497666 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001182070 |
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| Protein GI | 146291646 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.815557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGCAC CAGGACTGGA TCAAGAATTA CAGCAATTAC AGGGCGTTTA TCAACTGATC
ACTGAGTTTT TAGTCACCTA TAGCTTTCAG TTACTTGGTG CTTTATTGAT CTTTTTATTA
GGTTTATGGG TTGCGAGTAA AGTCTCCCGT TTAGTCGCCA AACAGTTTGA AAAACACAAT
ATTGATATCA CCCTTAGCAA CTTTGTCAGT AATCTTATTC GGATTCTGAT CATTGTTATG
GTGGGGATTA TCGCCCTAGG CAAAATCGGT ATTAGTGTTA CTCCAATGGT GGCAGCTATT
GGTGCGGCCT CTTTAGGTGC AGGCTTAGCT TTGCAGGGCA TGTTATCCAA CTACGCTGCA
GGCGTAACTA TTATCGTAAC CAGACCGTTT GTAGTCGGAA ATACTATTGA AATTAAAGGC
GAAAGTGGTG TTGTTAAGCG TATTAATTTA GGAATGACGA TACTGACGAA TGAAGAAGGT
GAGCAAATCA GTATCCCGAA TAAACATATC GTCGGTGAGA TCCTACATAA CTCTTTTAGC
AATAAACTGG TCGAAACCCA GTTTAATCTC AGTTACAGCA CAGATCCTGA GCATGCAATC
GCAGTGATTA CAAGCCAACT CACTAATAAC CCTTATGTTC ATCAGGAAAC GACACCTAAT
ATCGGCATAA ACGGTTTTAA CGCGGTAGGA ATTGAAATGG GGGTGCGTTA CTGGGTGCCA
ACCCAGAGCT ATTTTCAGCA TAAATATAAG GTCAATCTTG ATTTATATCA TGCACTTAAA
AACGCAGGAA TTGAGATAGC TTGCCCAATG AAAGAAATTC ACTTACAAAA TAAATAG
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| Protein sequence | MIAPGLDQEL QQLQGVYQLI TEFLVTYSFQ LLGALLIFLL GLWVASKVSR LVAKQFEKHN
IDITLSNFVS NLIRILIIVM VGIIALGKIG ISVTPMVAAI GAASLGAGLA LQGMLSNYAA
GVTIIVTRPF VVGNTIEIKG ESGVVKRINL GMTILTNEEG EQISIPNKHI VGEILHNSFS
NKLVETQFNL SYSTDPEHAI AVITSQLTNN PYVHQETTPN IGINGFNAVG IEMGVRYWVP
TQSYFQHKYK VNLDLYHALK NAGIEIACPM KEIHLQNK
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