| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0535 |
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| Symbol | |
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| ID | 5078061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 581017 |
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| End bp | 582825 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497662 |
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| Product | histidine kinase |
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| Protein accession | YP_001182066 |
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| Protein GI | 146291642 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTAA TGTTTAAAGC TATCGGTTAT TTATTACTTT TAGGGTTGAG CTATGTGAGT
TTGAGCTATG CCGATGAAGC GACCGAAGTG AACTTATTTA AGGTGGGTGT TCTGGCGAAC
CACGGTGTAT TGCAGGCTAA GCAGCGTTGG CAGCCTATGA TGGATTATCT CAGTGAACAA
GTACCTAATA GCCATTTTGA AGTTGTCCCA GTTGATTTTA ATGGTATGAG TAGTGGCTTA
CTTAACCATG ACTTGCAGTT TATTGTGACC AACCCTGGGC AGTATTTACA CTTAAGTAAT
AATTTTCCGC TATCTTGGCT AGCGACGATG AAGAGCCGTA AGCATCAAGG CAGCACTTTT
ACGATAGGTG CAACTATCAT TGTACGTGCT GATAGCCCAA TTCGAACCCT ACAGGATTTA
CGGGGTAAAA ATGTGGTCGC AACCGATCCG CAGGCCTTAG GGGGGTATCA AGCAGCCATG
GGATTGCTGC ACAAAATGGG TTTTTTACCA GAGCAGTTTT TTGGGCAAGT GCGTTTTTTA
GGTTTCCCGT TAGAACCGCT GATTTATCAG GTGCGTGATG GTAGCGCCGA TGCAGCCATA
GCCCCCTTTT GTACCTTAGA AGAAATGATT GAGACAGGGC TGATTAATAA AGCTGATTTT
CGAGTGATCC ACCCGACTAA GCCCGCAGGG TATGACTGTG AGGTAAGTAC CCAGTTGTAT
CCCAGTTGGT CATTTGCTGC GGCAGATACT GTTTCCCCGA GGATTACTAT GCAGATCTCC
CGCGCTTTAT TTGATTTACC TCCTGACCAT GTGGCTGCGA TTACCGCCGA TACGTTGGGC
TGGACAGCGC CCGTTAGCCA GTTAAAAGTC ATTGAATTAT TCAAAGAACT ACAACTACAG
GGTGCTTCAC CACCGCTTTA TCAAACCGTT TATAAATGGA TGGAAAAAAA TAAAGAATGG
GGCGGAGTGT TGTTACTGAT TTTTATTGTT TCAACTATTT ATCACCTTTG GCTTGAATAT
AAATTTCGCC AGAAGAGTGA GTTTTTAATC AGTACAGAGC GGCAACTAAA GGATAAGGCA
CTGCAACTAG AGCGGTTACA AAGTGCGGCG ATTTTGGGGG AAATTGGCGC AGGCCTTGCC
CATGAGCTTA ATCAACCTAT AGCAGCCATC ACCCAATACA GTGAAGGTGC CATGTTACAA
CTGGAAAGGC TTGGGCAAAA TAATCCCGAA CTTTATGATG TGCTTGGAAA AATTAATGCT
CAATCGATTC GCGCAGGAGC GGTTGTGCAT CGTATTCGCG GCTTACTTAA ACGGCGCCAA
GCTAAGACTG AACCTTTAGA TATTACGTTG GTGGTGAAAG AAGCCTTAGC TTTACTGCGG
CGAGAGTTAG ATAGGGCTAA TGTACAAGTG AATGTACGAG TACAGGGCGA GCCATTTGAA
CTTACGGGTG ATAGTGTGGG TTTAAGCCAA ATGTGGGTCA ATCTAGTGAA AAATAGTCTA
GATGCGCTAG AAACCTGTGG TGATACTCGG GTGCGGCAGT TATGGATTGA TATCTACTAT
TTGCCGCATG AAATCAGAGT ATTCGTTATT GATAATGGTG AAGGTCTACA GGGGCAGGCG
AGTGAGTTGA TGGCATCTTT CGCCTCAACC AAGGATGAAG GTTTAGGGCT AGGTTTGGCG
ATCTGTAAGG ATGTGGTTAC CCGCCATCAC GGGAGTATTC AAATTGAAAA CTGCCAAGAT
TGCACCACTG AAGCAGCATT ACCTTGGCAG CAAGGTTGCA TTGTCACCGT AGTATTACCA
CGGGAATAG
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| Protein sequence | MRLMFKAIGY LLLLGLSYVS LSYADEATEV NLFKVGVLAN HGVLQAKQRW QPMMDYLSEQ
VPNSHFEVVP VDFNGMSSGL LNHDLQFIVT NPGQYLHLSN NFPLSWLATM KSRKHQGSTF
TIGATIIVRA DSPIRTLQDL RGKNVVATDP QALGGYQAAM GLLHKMGFLP EQFFGQVRFL
GFPLEPLIYQ VRDGSADAAI APFCTLEEMI ETGLINKADF RVIHPTKPAG YDCEVSTQLY
PSWSFAAADT VSPRITMQIS RALFDLPPDH VAAITADTLG WTAPVSQLKV IELFKELQLQ
GASPPLYQTV YKWMEKNKEW GGVLLLIFIV STIYHLWLEY KFRQKSEFLI STERQLKDKA
LQLERLQSAA ILGEIGAGLA HELNQPIAAI TQYSEGAMLQ LERLGQNNPE LYDVLGKINA
QSIRAGAVVH RIRGLLKRRQ AKTEPLDITL VVKEALALLR RELDRANVQV NVRVQGEPFE
LTGDSVGLSQ MWVNLVKNSL DALETCGDTR VRQLWIDIYY LPHEIRVFVI DNGEGLQGQA
SELMASFAST KDEGLGLGLA ICKDVVTRHH GSIQIENCQD CTTEAALPWQ QGCIVTVVLP
RE
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