Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0533 |
Symbol | |
ID | 5078059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 578755 |
End bp | 579939 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640497660 |
Product | flagellar biosynthesis protein, putative |
Protein accession | YP_001182064 |
Protein GI | 146291640 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAATC TCATAATAAA ACCCGGTTAT GTCACTCAAT TCCAATGTGT TGGACCTGAA TGCGAAGACA GCTGCTGTTA CGATTGGCGA ATATCATTCG ATAAAAAGAG CTATAAAAAT ACGATTAAAC ATCCATTGTT AGCTACAACA GCAAAAAGCG CATTTATTGA AACCAAAAAA AGTACAAGCG ATTGGGCTGA CATTAGACTT AATGAGCAAG GTGCATGTCC ATTTGTTAAC GAACATAAGC TTTGTGACAT CCACGCAAAA GCGGGTGAAC AGGCCTTAAG TCATACATGT AAAACTTATC CAAGGATCCA CAAGGTCATT GGCGGTAATA AATACGAAAG CCTCTATCTA TCTTGCCCAG AAGTCACTCG TTTGGTGTTA TTTAATCCTA ATGCCTTCCA ATTTGATTCT AATATAAGTG GCATAAAACA GCCTTCTACA CCAAGTCCTA TTTGGCTAGA AAAAACCCAT GAATACAGTC TCGACTTATT AGTCAATCTG GGGCTTGATT GGGAACAAGT ACTGCTAGCC ATTGGGCTAT TAATCAAGGT CAGTGACCAA GTTCGTCAAA ATATCTTACC GATAGAAGAG CTAGATAAGC GCTTACAGCA ACTAAAATTA TATGCCCAGT CAGGCGCATT GGCAGAGCAA TATAAGAACT TACCTTATTC CCCACTGCCG CAGATGCACG CTTTTATTGC AGTCCATAAT GAGTTGTGCA AAACCCACTC GAGAGGTGTG AGAGAAAGAT TTACGTCGTT AAATCAGGCG GTTGCCGCAC TATGTAACGA AGAAAACAAC TATCAAATTG ATGCGTTGAA TCAAGCATGG GCAGAGCATG CAGTACCTGC ATTGATTAGC CATACGGATC TTTTTGAACG ATATATTTTG TATTCAATTT ACCACCACCA CTTCCCCTTA ATAGACTCAC AACAACTATC TTGGGAAGCA TTCCGTTTAC TCGTACTCGA TTGTTTCATG ATCCGCAGCT ATTTATCTGC AATAGCCTTT AAAAATAAAG GACTATCTGA AAGTGATATT GTTATGTGTT TTCAGCTTTA TCAAGTAGTT AGGCAGCATA AAATTGAGTT TACCCAAAGT ATGAGCAAAA CATTAGAGGA ATGCGGAATA GACAGTGTGC CAGCTGCAAT TTGCCTTTTA AAAACAAATA TCTAA
|
Protein sequence | MDNLIIKPGY VTQFQCVGPE CEDSCCYDWR ISFDKKSYKN TIKHPLLATT AKSAFIETKK STSDWADIRL NEQGACPFVN EHKLCDIHAK AGEQALSHTC KTYPRIHKVI GGNKYESLYL SCPEVTRLVL FNPNAFQFDS NISGIKQPST PSPIWLEKTH EYSLDLLVNL GLDWEQVLLA IGLLIKVSDQ VRQNILPIEE LDKRLQQLKL YAQSGALAEQ YKNLPYSPLP QMHAFIAVHN ELCKTHSRGV RERFTSLNQA VAALCNEENN YQIDALNQAW AEHAVPALIS HTDLFERYIL YSIYHHHFPL IDSQQLSWEA FRLLVLDCFM IRSYLSAIAF KNKGLSESDI VMCFQLYQVV RQHKIEFTQS MSKTLEECGI DSVPAAICLL KTNI
|
| |