Gene Sputcn32_0533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0533 
Symbol 
ID5078059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp578755 
End bp579939 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content39% 
IMG OID640497660 
Productflagellar biosynthesis protein, putative 
Protein accessionYP_001182064 
Protein GI146291640 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAATC TCATAATAAA ACCCGGTTAT GTCACTCAAT TCCAATGTGT TGGACCTGAA 
TGCGAAGACA GCTGCTGTTA CGATTGGCGA ATATCATTCG ATAAAAAGAG CTATAAAAAT
ACGATTAAAC ATCCATTGTT AGCTACAACA GCAAAAAGCG CATTTATTGA AACCAAAAAA
AGTACAAGCG ATTGGGCTGA CATTAGACTT AATGAGCAAG GTGCATGTCC ATTTGTTAAC
GAACATAAGC TTTGTGACAT CCACGCAAAA GCGGGTGAAC AGGCCTTAAG TCATACATGT
AAAACTTATC CAAGGATCCA CAAGGTCATT GGCGGTAATA AATACGAAAG CCTCTATCTA
TCTTGCCCAG AAGTCACTCG TTTGGTGTTA TTTAATCCTA ATGCCTTCCA ATTTGATTCT
AATATAAGTG GCATAAAACA GCCTTCTACA CCAAGTCCTA TTTGGCTAGA AAAAACCCAT
GAATACAGTC TCGACTTATT AGTCAATCTG GGGCTTGATT GGGAACAAGT ACTGCTAGCC
ATTGGGCTAT TAATCAAGGT CAGTGACCAA GTTCGTCAAA ATATCTTACC GATAGAAGAG
CTAGATAAGC GCTTACAGCA ACTAAAATTA TATGCCCAGT CAGGCGCATT GGCAGAGCAA
TATAAGAACT TACCTTATTC CCCACTGCCG CAGATGCACG CTTTTATTGC AGTCCATAAT
GAGTTGTGCA AAACCCACTC GAGAGGTGTG AGAGAAAGAT TTACGTCGTT AAATCAGGCG
GTTGCCGCAC TATGTAACGA AGAAAACAAC TATCAAATTG ATGCGTTGAA TCAAGCATGG
GCAGAGCATG CAGTACCTGC ATTGATTAGC CATACGGATC TTTTTGAACG ATATATTTTG
TATTCAATTT ACCACCACCA CTTCCCCTTA ATAGACTCAC AACAACTATC TTGGGAAGCA
TTCCGTTTAC TCGTACTCGA TTGTTTCATG ATCCGCAGCT ATTTATCTGC AATAGCCTTT
AAAAATAAAG GACTATCTGA AAGTGATATT GTTATGTGTT TTCAGCTTTA TCAAGTAGTT
AGGCAGCATA AAATTGAGTT TACCCAAAGT ATGAGCAAAA CATTAGAGGA ATGCGGAATA
GACAGTGTGC CAGCTGCAAT TTGCCTTTTA AAAACAAATA TCTAA
 
Protein sequence
MDNLIIKPGY VTQFQCVGPE CEDSCCYDWR ISFDKKSYKN TIKHPLLATT AKSAFIETKK 
STSDWADIRL NEQGACPFVN EHKLCDIHAK AGEQALSHTC KTYPRIHKVI GGNKYESLYL
SCPEVTRLVL FNPNAFQFDS NISGIKQPST PSPIWLEKTH EYSLDLLVNL GLDWEQVLLA
IGLLIKVSDQ VRQNILPIEE LDKRLQQLKL YAQSGALAEQ YKNLPYSPLP QMHAFIAVHN
ELCKTHSRGV RERFTSLNQA VAALCNEENN YQIDALNQAW AEHAVPALIS HTDLFERYIL
YSIYHHHFPL IDSQQLSWEA FRLLVLDCFM IRSYLSAIAF KNKGLSESDI VMCFQLYQVV
RQHKIEFTQS MSKTLEECGI DSVPAAICLL KTNI