| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0523 |
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| Symbol | |
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| ID | 5078049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 569342 |
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| End bp | 570049 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640497650 |
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| Product | C factor cell-cell signaling protein |
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| Protein accession | YP_001182054 |
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| Protein GI | 146291630 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATAC TTATCGTTGG CGGAAGTGGT GGCATTGGTA AAGCCATGGT TAAACAAATC
CAAGAAACAT ATCCAGACGC GGCTGTGCAT GCCACCTACA GGCATCATCC TCCCCATGAT
ATGCAGGAGA AGATCCAATG GCATGCGTTA GATGTAACCA ATGAAGCCGA GATTAAACAG
CTAAGTGAAC AACTCGCTAA ATTAGATTGG GTCATTAACT GTGTTGGCAT CTTACACACC
CAAGATAACG GGCCTGAAAA AAGTTTACAG TCCCTCGATA CGGATTTTTT CCAGCATAAT
CTAAAGTTAA ATACGCTTCC CAGCGTCATG CTGGCAAAAC ACTTTGAGCC TGTGTTAAAA
CGCAGTGTGT CTGCAAGATT TGCCGTGGTG TCGGCCAAAG TCGGCAGTAT TACTGATAAC
AGATTGGGTG GCTGGTATAG CTATCGCACC TCAAAAGCGG CACTGAATAT GTTTCTTAAA
ACGCTGTCGA TTGAATGGCA AAGGACAATG AAACACTGTG TGGTGCTATC ACTTCATCCC
GGCACTACAG ATACGTCATT ATCCAAACCT TTTCAGCAGA GTGTGCCCAA AGATAAATTG
TTTACACCGC AATACGTTGC CCAGTGTTTA GTGAGCATTA TTGCCAATGC CACTCCAGCT
CAAACGGGAA GATTTTTAGC CTACGATGGT GCAGAGCTTC CTTGGTAG
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| Protein sequence | MEILIVGGSG GIGKAMVKQI QETYPDAAVH ATYRHHPPHD MQEKIQWHAL DVTNEAEIKQ
LSEQLAKLDW VINCVGILHT QDNGPEKSLQ SLDTDFFQHN LKLNTLPSVM LAKHFEPVLK
RSVSARFAVV SAKVGSITDN RLGGWYSYRT SKAALNMFLK TLSIEWQRTM KHCVVLSLHP
GTTDTSLSKP FQQSVPKDKL FTPQYVAQCL VSIIANATPA QTGRFLAYDG AELPW
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