Gene Sputcn32_0521 details

Gene Information

• Locus tag: Sputcn32_0521
• ID: 5078047
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 568234
• End bp: 568785
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640497648
• Product: two component Fis family transcriptional regulator
• Protein accession: YP_001182052
• Protein GI: 146291628
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAAAT TGTTGATTGT TGAGGATGAC CACGCCCTTG CGAGTGTTTT GGAACGTCGT 
CTTACGCGCC ATGGCTTTAA TTGTCGTCTA ACCCATGATG CTAGCGATGT ACTGCTGGTG 
GCGCGGGAGT TTCGACCCAG CCATATTCTG TTGGATATGA AGCTTGCTGA AGCCAATGGG 
TTAAGTTTAA TTGTGCCGCT GCGTAATTTA CTGCCGAAGG TGATGATGGT CTTGCTCACA 
GGCTATGCCA GTATCGCAAC GGCGGTGGAA GCGATTCGCC TCGGCGCCGA TAACTATTTG 
GCTAAACCTG TCGATACCCA AACACTGCTT GTTGCGCTGG ATATAGATAC GCAGTCACAT 
TTATTGCAAG AGGATGAAAT TGATGACTCG CCGCTTAATC CTAAACGGCT GGAGTGGGAA 
CATATTCAGC AAGTGCTCAA TGCGAATCAG GGCAATGTGT CGGCTACCGC CCGCCAGCTT 
GGTATGCATC GCCGTACTTT GCAGCGTAAG TTATTAAAGA AACCCGTGAG TGAAACTGGG 
CCGCTAAAGT AA 

 

Protein sequence

MKKLLIVEDD HALASVLERR LTRHGFNCRL THDASDVLLV AREFRPSHIL LDMKLAEANG 
LSLIVPLRNL LPKVMMVLLT GYASIATAVE AIRLGADNYL AKPVDTQTLL VALDIDTQSH 
LLQEDEIDDS PLNPKRLEWE HIQQVLNANQ GNVSATARQL GMHRRTLQRK LLKKPVSETG 
PLK