| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0519 |
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| Symbol | |
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| ID | 5078045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 565901 |
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| End bp | 566818 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640497646 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001182050 |
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| Protein GI | 146291626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTAA CTGTCCGCGC CGCTCAACCT TCCTATGTAG TACTGCCCCG GAATATTACC
GATACGCCGA CAGTATTTGC GTTTCTTTCG ACACACTTTG CGCGTATCGG TGAAGAGGTT
TGGCGTGAGC GTATTCTCGA TGGCAAAGTG CATTGGCAGG ATGGCAGTTT GATCGCGCTA
GATACACTTT ACCGTCCAAT GGCGAGGGTA TATTACTATC GCGAAGTGCC TGTTGAGACA
AAAGTCCCCT TTGAAGAACA GATTCTATTT CAAGACGATA ACCTTATCTT GGCCTGTAAA
CCGCATTTTT TGCCTGTAAC GCCTAGTGGT AATTACGTGA ATGAGTGTTT AGTACATCGA
TTGAGGCTGC GAACGGGCAT CGAGACCATT GCTCCGGCCC ATAGATTAGA CCGTGAAACC
GCAGGAGTGA TTTTGATGAC AATTCAGCCT GAAACACGTC ATCTTTATCA TCAACTTTTT
GTCGATAATG CCATTTGTAA GGATTATCAG GCCATTGCAA AACTCACACC TGGAATTATT
GAGCAATACC AAAAAGGCCA TTTAACTTTG CCACTGCATT GGACGGTAAA AAATCGTATG
CAGCCAGGTG ATCCGAGTTT CACTATGCAA GTGGTTGAAG GTGAAGCGAA TAGCCATTCT
GAAATCAGTT TGGTGGCGAT AAAAGACGAC TTAGGATTAT TCCATTTAAG CCCGATTACG
GGAAAAACGC ATCAACTAAG AGTGCATATG TTAAGTCTAG GTATGCCATT GTTAAACGAC
AGATTTTATC CAAAATTACA GCCCAAAAGT CCAGATAATT TTGCTACACC GTTAAAGTTA
ATGGCCCAAC GTTTGCGGTT TGTGGATCCT GTGAGCGGTA TTCACCACGA TGCTCAGTGC
AATGGGTTTG AGTTTTAA
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| Protein sequence | MTLTVRAAQP SYVVLPRNIT DTPTVFAFLS THFARIGEEV WRERILDGKV HWQDGSLIAL
DTLYRPMARV YYYREVPVET KVPFEEQILF QDDNLILACK PHFLPVTPSG NYVNECLVHR
LRLRTGIETI APAHRLDRET AGVILMTIQP ETRHLYHQLF VDNAICKDYQ AIAKLTPGII
EQYQKGHLTL PLHWTVKNRM QPGDPSFTMQ VVEGEANSHS EISLVAIKDD LGLFHLSPIT
GKTHQLRVHM LSLGMPLLND RFYPKLQPKS PDNFATPLKL MAQRLRFVDP VSGIHHDAQC
NGFEF
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