| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0501 |
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| Symbol | |
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| ID | 5078449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 547558 |
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| End bp | 548307 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640497628 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001182032 |
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| Protein GI | 146291608 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCAAC AGCAGCCACT TATCAGCCAT TTGCTTGAAC TTAGGTCCAA GCTGCTAAAA
TCCATTGCTA GCGTGTTATT GGTGTTCATT TGCAGTGTGT ACTGGGCAAA TGATATCTAC
CATTACATGG CAATACCTTT AATGCAGTCT TTACCGCTTG GTGGCAGTAT GATTGCGACA
GATGTCGCTG CGCCATTTTT TGCGCCTTTT AAATTGACGC TCGTTTTATC ATTTTTTGTG
GCTGTGCCTT ATGTGTTATT TCAAATTTGG TCCTTCGTTG CACCGGGTTT ATATAAACAT
GAAAAACGCT TAGTGATGCC ACTGCTATTC AGCAGTACCG TATTGTTTTA TCTCGGCATT
GCCTTTGCCT ATTATATTGT ATTTCCTGTT GTTTTTGGAT TCTTTGCTAA TAATGCACCG
GAAGGAGTTC AAGTTGCGAC GGACATTACT AGCTACCTAA ACTTCATTTT GAAGCTTTTC
TTTGCCTTTG GCCTATCCTT TGAAATCCCC ATCGCAGTCG TTTTACTCTG CTGGGCCGGG
GTCACAACTC CTGATGACTT AAGACAAAAA CGCCCCTATA TTGTTGTTGG CGCCTTCGTT
GTTGGTATGC TATTAACACC ACCTGACGTC ATCTCGCAGA CTATGCTTGC TGTACCAATG
CTGCTATTGT TTGAAGGTGG TTTATTCGCC GCTCGTTTTT ACAGCAAACC TAGCGACGAA
TCAGACGACG AAGAACAAAC CAATAGCTAA
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| Protein sequence | MSQQQPLISH LLELRSKLLK SIASVLLVFI CSVYWANDIY HYMAIPLMQS LPLGGSMIAT
DVAAPFFAPF KLTLVLSFFV AVPYVLFQIW SFVAPGLYKH EKRLVMPLLF SSTVLFYLGI
AFAYYIVFPV VFGFFANNAP EGVQVATDIT SYLNFILKLF FAFGLSFEIP IAVVLLCWAG
VTTPDDLRQK RPYIVVGAFV VGMLLTPPDV ISQTMLAVPM LLLFEGGLFA ARFYSKPSDE
SDDEEQTNS
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