Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0494 |
Symbol | |
ID | 5078435 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 532406 |
End bp | 533305 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497614 |
Product | peptidase M23B |
Protein accession | YP_001182025 |
Protein GI | 146291601 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000148053 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGTAA CAGTATTTAT TCAAGGTCGG AATGGCGTCA CACGCTGGCA ACCCAGTAAA CGTTGGTTGC TACTTCCTAT ATTATTGTTG GCAACGGGGA CGGGTATTTA TCAGCACAAC TCTGCTCGAT TTGAAAATCA GCAAGCCAGT GTGGATAATG ATCGTCTCGT ACGCGAACAA CAAAAGAAAC AAGTCTTAGA GCTAAAAAGT GCCACCGAGT CTCAACTAGC CATGCTAGCG ACTCATGTTG CACGTATGCA AGCCAAAATC ACCCGTCTCG AAGCTTTAGG CCAACAGGTT GCCCAACAGA ATAAACTGGC TGAGGATTTT GATTTTTCCT CAGAAGTTGG GGTGGGCGGA TTAAGCGAGT TAGGCACCAA TATCGAGCTT GGTCAGCTTA TCGATGATAT GGATAAGTTG GCTTCACGAA TTGACAACAA TAATGTTCAA CTTTCACTAC TTGAAACTGT GTCATCTAAC CACCATATAG ATGATGAGCG TTATATATCA GGTATCCCAC TCGATAAAGG TTGGTTATCG TCGCCTTATG GATTGCGTAA TGATCCTTTT AATGGTCGCA GATCTGTGCA CAAAGGAATT GATTTTACGG GTCGAGAAGG TGCTAAAGTC GTGGCGACTG CTGCTGGTGT GGTGACTTGG GCTGGGAATA TGTTTGGTTA TGGCGAATTA GTTGAAATTG ATCATGGTAA TGGTTTTCGA ACTCGTTATG GCCATAATAA AGCTTTGTCA GTGACTGTAG GTGATGTAGT CGCAAAGGGC GATACTATCG CCAGTATGGG AAGCACTGGG CGCTCTACTG GTGCTCATGT GCATTATGAA GTGTTGCGTG GCGGACAACA GATAGATCCA CAAAAGTTTG TCTACCGCAA AGCAAGTTAA
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Protein sequence | MSVTVFIQGR NGVTRWQPSK RWLLLPILLL ATGTGIYQHN SARFENQQAS VDNDRLVREQ QKKQVLELKS ATESQLAMLA THVARMQAKI TRLEALGQQV AQQNKLAEDF DFSSEVGVGG LSELGTNIEL GQLIDDMDKL ASRIDNNNVQ LSLLETVSSN HHIDDERYIS GIPLDKGWLS SPYGLRNDPF NGRRSVHKGI DFTGREGAKV VATAAGVVTW AGNMFGYGEL VEIDHGNGFR TRYGHNKALS VTVGDVVAKG DTIASMGSTG RSTGAHVHYE VLRGGQQIDP QKFVYRKAS
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