| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0483 |
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| Symbol | |
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| ID | 5080738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 519932 |
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| End bp | 521314 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640497603 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001182014 |
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| Protein GI | 146291590 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCTC TTTCACTCGA AGTGCTAAGT CAACATTTAG GTGCGCATCG AGTCGGTAAC
GACGTTACCA TCCAAGATTT AAGCAGTGAT AGCCGCAAAG TCGGCGACGC AACCCTATTT
GTCGCTTTAA AAGGTGAGCG TTTCGATGGC CATGATTTCG CAGCAACCGC TATTGAGAAT
GGCGCCGCAG CATTAATGGT TGAACGTGAG CTCGCTCTGA ATATTCCACA ACTGATAGTG
ACAGATTGTC AAAAAGCGAT GGGCGCGATA GGAGCTTATG TCCGTGACCA AATTAATCCC
ATTTGTGTGG CGTTGACGGG TTCAAACGGC AAGACCAGCG TAAAAGAAAT GATCGCCACT
ATTTTGTCGG CTAAATACCA AGTGCTTTAC ACCGCGGGTA ATTTTAATAA TGAGATCGGT
GTGCCCTTAA CCTTGCTGCG CTTAACGCCT GCGGATGAGT ATGGGGTGTT TGAGCTGGGC
GCTAATCATA AAGGTGAGAT TGATTACACC TCTGGGCTAG TCCGTCCAAA TGTGGCGTTA
GTCAATAATG TTGGCAGTGC CCATTTAGAA GGATTTGGCT CGCAAGCGGG TGTTGCCCAA
GCTAAATCGG AAATTTTTAA CCATCTGCAG GCCGACGGTA CTGCAATTAT CAATGCTGAT
GATGCTTTCG CCGATGTGAT GAGTGTTAAA GCAAGACCTT ATAAACAATT GCATTTCTCT
CAACAAGAGG GCGCAGCAAA GCGTCGTATT GACGTTATTG CTACAGGACA TAAAGCAGAT
GCCGATGGCT GTTATCGTTT TATGCTCAAC TACTTAGGTG AATCTTGTGA CGTTAAGTTA
CCGCTGGCGG GGCGTCATCA GGTCAGTAAT GCGTTAGCTG CAGCAAGCGT ATGTATTGCA
CTGGGATTAA GTTTGACTGA TATCGCCCAT GGCCTAAGCC AATTAACGCC TGTAAAGGGG
CGTATGCAGC CGAGTCAATT AGGACGAATT CGTTTAATCG ACGATAGCTA TAATGCAAAT
CCTGTATCTG TTGGCGCCGC TATCGCTTGG TTAAAGGAAA TTTCTGAAAA TCGCTGTTTG
GTACTGGGAG ATTTGGGCGA ATTAGGCGAC AATGCGCCCC TTTTACACGC CGAACTCGGA
CAACTGGCCA AACAGCAGGG GATTGATGCG CTGTTTTGTA CAGGAGCGTT GAGTCAGCAT
ACGAGCCAAG CTTTTGGGGC GGAGCACCAT GAGAGCGTGG CTGTGTTAGT AGAAAAATTG
ATAAAGCACA TTAACCAGTT GCCGGGACAG GTGACGGTTT TAGTCAAAGG TTCACGTAGC
GCCGCTATGG AGCGGGTCGT GGATGGCCTA ACAGTAGCCT TCGGGCGTGG GGAGTTAGTG
TAA
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| Protein sequence | MIPLSLEVLS QHLGAHRVGN DVTIQDLSSD SRKVGDATLF VALKGERFDG HDFAATAIEN
GAAALMVERE LALNIPQLIV TDCQKAMGAI GAYVRDQINP ICVALTGSNG KTSVKEMIAT
ILSAKYQVLY TAGNFNNEIG VPLTLLRLTP ADEYGVFELG ANHKGEIDYT SGLVRPNVAL
VNNVGSAHLE GFGSQAGVAQ AKSEIFNHLQ ADGTAIINAD DAFADVMSVK ARPYKQLHFS
QQEGAAKRRI DVIATGHKAD ADGCYRFMLN YLGESCDVKL PLAGRHQVSN ALAAASVCIA
LGLSLTDIAH GLSQLTPVKG RMQPSQLGRI RLIDDSYNAN PVSVGAAIAW LKEISENRCL
VLGDLGELGD NAPLLHAELG QLAKQQGIDA LFCTGALSQH TSQAFGAEHH ESVAVLVEKL
IKHINQLPGQ VTVLVKGSRS AAMERVVDGL TVAFGRGELV
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