Gene Sputcn32_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0472 
Symbol 
ID5080727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand+ 
Start bp507330 
End bp508424 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content50% 
IMG OID640497592 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001182003 
Protein GI146291579 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AAATAGCAGT ATTAGCAGGG GATGGGATCG GTCCTGAAGT GATGGCAGAG 
GCGCGTAAAG TGCTGCGTGA AGTGGAAGCG CGATTCGATT TTAATATCGA ATACACTGAA 
TATGATGTTG GCGGTATTGC CATTGATAAC CACGGTTGTC CCTTACCCGA TGCCACGCTA 
AAGGGCTGTG AAGCGGCCGA TGCGATCCTA TTTGGCTCGG TAGGCGGCCC TAAGTGGGAA 
AAGTTACCGC CAAATGAGCA ACCTGAGCGC GGTGCACTAC TGCCCTTGCG TGGTCACTTC 
GAACTGTTTT GTAATCTGCG CCCAGCTAAA TTGCATGATG GCTTAGAACA TATGTCACCG 
CTGCGTAGCG ATATCTCTGC CCGTGGATTT GATGTCTTAT GTGTACGCGA GTTAACTGGC 
GGCATTTATT TTGGTAAGCC AAAGGGTCGT CAAGGTGAAG GCGAAAATGA AGAAGCCTTC 
GATACCATGC GTTATAGCCG TCGCGAAATT AGCCGTATCG CCCGCATAGC CTTTGAAGCC 
GCCCGTGGTC GCCGTAAAAA AGTGACCTCA GTGGATAAAG CCAACGTGCT CGCCTGTTCA 
GTGTTATGGC GCCAAGTGGT TGAAGAAGTC GCGGTAGATT TCCCCGATGT CGAGCTTGAA 
CACATCTATA TCGATAATGC GACCATGCAG TTGCTACGTC GTCCCGATGA GTTCGATGTG 
ATGCTATGTT CTAACCTGTT CGGCGATATT TTATCCGACG AAATCGCCAT GTTAACGGGC 
TCTATGGGCT TGTTGTCATC GGCGAGCATG AACAGCACTG GCTTTGGTTT ATTCGAACCT 
GCGGGTGGCA GTGCGCCGGA TATCGCAGGT AAAGGCATTG CAAACCCTAT CGCCCAAATT 
CTGTCGGCGG CATTAATGCT GCGCCACAGC TTAAAGCAAG AAGAAGCCGC CTGTGCGATT 
GAACGCGCCG TAAGCAAAGC ATTAAATTCT GGCTACTTAA CTGGTGAGCT ATTGAGCAGC 
GACAAGCGTA GCCAAGCTAA ATCAACCGCC GAGATGGGTG ACTTTATCGC CAATGCTATA 
AAGGAAGGTG TGTAA
 
Protein sequence
MSYQIAVLAG DGIGPEVMAE ARKVLREVEA RFDFNIEYTE YDVGGIAIDN HGCPLPDATL 
KGCEAADAIL FGSVGGPKWE KLPPNEQPER GALLPLRGHF ELFCNLRPAK LHDGLEHMSP 
LRSDISARGF DVLCVRELTG GIYFGKPKGR QGEGENEEAF DTMRYSRREI SRIARIAFEA 
ARGRRKKVTS VDKANVLACS VLWRQVVEEV AVDFPDVELE HIYIDNATMQ LLRRPDEFDV 
MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NSTGFGLFEP AGGSAPDIAG KGIANPIAQI 
LSAALMLRHS LKQEEAACAI ERAVSKALNS GYLTGELLSS DKRSQAKSTA EMGDFIANAI 
KEGV