Gene Sputcn32_0469 details

Gene Information

• Locus tag: Sputcn32_0469
• ID: 5080724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella putrefaciens CN-32
• Kingdom: Bacteria
• Replicon accession: NC_009438
• Strand: +
• Start bp: 501600
• End bp: 503423
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640497589
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_001182000
• Protein GI: 146291576
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAAAGC TCGTACTCGA CACGCATGAT GATCCGCTCT CGCAACGCTT AGCACAGGTG 
TTTGGTTACC GTGACTTTAG GGACGGTCAG CGGGAGGTGA TAGAACGTAT CTGCGGCGGG 
CAAGATTGTT TAGTGATCAT GCCAACGGGC GGCGGTAAGA GTCTGTGTTA TCAGTTACCC 
GCTTTGATGA TGAATGGCAT CACTATTGTC GTCTCCCCAT TGATTTCTTT GATGAAAGAT 
CAAGTCGATA GCTTATTGCA AACCGGTGTT GCTGCGGCTT ATCTGAATTC TTCTTTGCCG 
CGAGAGCAGA GTGCCGAAGT ATTAAGGCAG CTACGCCACG GTGAGTTAAA ACTACTTTAT 
GTGTCACCTG AGCGCCTATT AACCGCTGAT TTTATTGAGC GTATGCAGTC GCTGCAGCTG 
GCGATGTTTG CCATCGACGA GGCGCACTGT ATTAGTCAGT GGGGCCATGA TTTTCGCCCT 
GAATATGCAG CACTCGGCCA GTTAAAACAA CTCTTCCCCT ATGTGCCTAT GATGGCGCTG 
ACTGCAACAG CAGATCAGGC AACGCGCCAA AGTATTTGTG AGCGTTTAGG TATTGATCCT 
TACCGACTAT TATCGAGTTT TGATAGGCCG AATATTCGCT ATACAGTGGC CGAAAAACTC 
AATGCCGCTA ACCAGTTACG ACATTTTCTA CTACAACAAA ATGGTAGCAG TGGGATTATT 
TATTGCAGCA GTCGTCGCCG TGTCGATGAA GTGGCCGACC GTTTATGTCT GCAAGGTTTT 
AATGCCAAGG CCTATCATGC GGGAATGACG CAGGAAGACC GCGGTGCAGT ACAGGACAGT 
TTCCTTAAAG ATCAAATTGA TATCGTCGTT GCGACCGTGG CGTTTGGTAT GGGGATCAAT 
AAGTCGAATG TGCGTTTTGT GGTGCATTAC GATATCCCGA AAAGTATCGA AGCCTATTAT 
CAGGAAACGG GCCGAGCAGG CCGTGATGGG CTCGATGCCG AAGCTTTTAT GTTGTTCGAT 
CCCGCCGATA TTGGTCGGGT CAGACATTTG ATTGAACAGT CTGAACCTGG GCCGCAGCAG 
CAGGTCGAAT TCCACAAACT CAATACCATG GCGGCCTTTG CTGAGGCGCA AACCTGCCGC 
CGCCAAGTGC TGCTGCATTA CTTTGATGAA AGTGCATTAG AACCCTGTGG TAACTGCGAT 
ATTTGCCTCG ATCCGCCTAA GCGCTATAAC GGCACCGAAG ATGCGCAAAA GGTGCTGTCG 
TGTATTTATC GACTAGGACA GCGATTTGGT ATCAATCACT TAATTGAAGT GTTACGCGGT 
TCGAAAGGCG CACCGATAGT CGATCGAGGG CATGACAAAC TCACGACTTG GGGGATTGGT 
AAAGATAAAA GCCATGAATA TTGGCTGAGT GTGATCCGTC AACTCATTCA TCTGGGATTA 
GCAAGCCAAG ATGTGACTCG TGGCTCCTCT ATTACCTTAA ACCCATCGGC ACGACCTGTG 
CTCAAAGGGG AGGTGGCGTT AATGCTTGCT GAACCGCGTA TTCAGTTAAC AACCACAAAA 
CGTAAGGCGA GTCAGTCTAA AGCACCGCTT AATTATGACC GTAAGTTATT TGCGCGGCTA 
AAATTGTTGC GAAGAACCAT TGCCGAACAG CAGGACGTGC CGCCATATTT AGTGTTTAAC 
GATGCGACAC TCGCAGAAAT GGCGGCCATG ATGCCAACGA GTGCGGGTGA AATGCTCGCT 
GTTAACGGGG TTGGCGAGCG TAAACTCAGC CGTTTTGGTG ACGATTTCCT TGATGAGATT 
GCAGCTTATT TAGCTGGAGA GTGA 

 

Protein sequence

MEKLVLDTHD DPLSQRLAQV FGYRDFRDGQ REVIERICGG QDCLVIMPTG GGKSLCYQLP 
ALMMNGITIV VSPLISLMKD QVDSLLQTGV AAAYLNSSLP REQSAEVLRQ LRHGELKLLY 
VSPERLLTAD FIERMQSLQL AMFAIDEAHC ISQWGHDFRP EYAALGQLKQ LFPYVPMMAL 
TATADQATRQ SICERLGIDP YRLLSSFDRP NIRYTVAEKL NAANQLRHFL LQQNGSSGII 
YCSSRRRVDE VADRLCLQGF NAKAYHAGMT QEDRGAVQDS FLKDQIDIVV ATVAFGMGIN 
KSNVRFVVHY DIPKSIEAYY QETGRAGRDG LDAEAFMLFD PADIGRVRHL IEQSEPGPQQ 
QVEFHKLNTM AAFAEAQTCR RQVLLHYFDE SALEPCGNCD ICLDPPKRYN GTEDAQKVLS 
CIYRLGQRFG INHLIEVLRG SKGAPIVDRG HDKLTTWGIG KDKSHEYWLS VIRQLIHLGL 
ASQDVTRGSS ITLNPSARPV LKGEVALMLA EPRIQLTTTK RKASQSKAPL NYDRKLFARL 
KLLRRTIAEQ QDVPPYLVFN DATLAEMAAM MPTSAGEMLA VNGVGERKLS RFGDDFLDEI 
AAYLAGE