Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0463 |
Symbol | rpmB |
ID | 5080718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 497022 |
End bp | 497258 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497583 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_001181994 |
Protein GI | 146291570 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000843852 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAGAG TATGCCAAGT TACTGGCAAG AAGCCGATGG TTGGTAACAA CCGTTCGCAC GCAAAAAACG CGACCCGTCG TCGTTTTTTA CCTAACCTAC AAAACCACCG TTTTTGGTTA GAAGAAGAAA AGCGTTTCGT ACAGTTACGT GTATCTACTA AAGGTATCCG TCTGATCGAT AAGAAAGGTA TTGAAGTTGT TGTTGCTGAA CTTCGTGCCC GTGGCGAGAA GGTATAA
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Protein sequence | MSRVCQVTGK KPMVGNNRSH AKNATRRRFL PNLQNHRFWL EEEKRFVQLR VSTKGIRLID KKGIEVVVAE LRARGEKV
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