Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0440 |
Symbol | |
ID | 5081424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 474309 |
End bp | 475883 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640497560 |
Product | histidine ammonia-lyase |
Protein accession | YP_001181971 |
Protein GI | 146291547 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase [TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCACA CCCAAGCCGC CGACTCAAAG AATCAATCAG ACTTAAAGAC TGTTGAGTTC GGCCGTCAAT TTCTAACCTT AGAACAAGTG GTTGCCGTCG CCAAGGGCGC ACCAGTCAAG CTCTGTGATG ATGCGGATTA TCAAGAATAT ATCCAAAAAG GTGCGCGCTT TATCGATAGC CTGCTGCACG AAGAAGGCGT GGTTTATGGC GTCACCACAG GTTATGGCGA CTCTTGCACA GTCAATGTGA GCTTAGATCT GGTCCACGAA TTGCCACTGC ATTTAACCCG CTTCCACGGC TGCGGTTTAG GCGAGACCTT AAGCATAATG CAGGCCCGCG CTGTGATGGC TTGCCGTTTA AACTCCTTAG CCATTGGCAA ATCTGGTGTG ACCTATGAGC TATTAAAGCG CATCGAAACT TTGCTCAATC TCAACATAGT CCCTGTAATC CCAGAGGAAG GTTCGGTCGG TGCCAGTGGT GATTTAACGC CGCTGTCGTA TTTAGCCGCC GTGTTAGTCG GTGAGCGCGA AGTGATTTAC CAAGGTGAGC GCCAAGCGAC TCAAGCTGTG TACGCTAAGC TCAACATTAT CCCGCATGTC CTGCGTCCAA AAGAAGGCTT AGCCCTGATG AACGGCACGG CTGTGATGAC GGCCTTGGCC TGTTTAGCCT TCGATCGCGC CCAATATCTT GCCCGCTTAA GTAGCCGCAT TACCGCTATG GCTTCGTTAA CGCTAAAAGG CAACTCGAAC CATTTTGATG AAATCTTATT TGCCGCTAAA CCGCATCTGG GGCAAAACCA AATCGCCACT TGGATACGGG AAGATTTAAA TCACCACGAA CATCCACGTA ATTCTGACAG GCTGCAGGAC AGATATTCCA TCCGCTGCGC ACCGCACATT ATCGGCGTGT TGCAGGATGC GCTGCCGTTT ATGCGTCAGT TTATCGAAAC CGAAGTCAAC AGCGCCAACG ACAACCCGAT TGTCGACGGC GAAGGCGAGC ATATTCTCCA CGGTGGCCAT TTTTACGGCG GCCATATCGC CTTTGCGATG GATTCACTTA AGAATACTGT GGCTAACTTA GCCGATCTTA TCGATCGCCA AATGGCGCTA GTGATGGACC CTAAGTTTAA TAATGGCTTA CCCGCTAACT TATCCGGCTC AACCGGCCCG CGCCGCGCGA TTAATCATGG CTTTAAAGCG GTGCAAATTG GCGTATCGGC GTGGACAGCA GAAGCACTCA AGCACACTAT GCCGGCCAGC GTATTCTCAC GCTCGACCGA ATGCCACAAC CAAGACAAGG TGAGCATGGG CACTATTGCT GCCCGCGACT GTATGCGCGT GCTGCAATTG ACCGAACAAG TCGCGGCGGC AGCCCTGCTC GCCATGACTC AAGGTATTGG CCTGCGTATC GCCCAAAATG AGCTGGACGA AGCCTCGCTC ACGCCATCAT TGGCGAAAAC CCTCGCCCAA GTGCGCGGTG ATTTTGAGAC CTTAATCGAA GACCGGCCGC TTGAAGCCGT GCTGCGCCAA ACCATAGCTA AAATCCAAGC GGGTGAATGG GAAGTGTGCC GATGA
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Protein sequence | MSHTQAADSK NQSDLKTVEF GRQFLTLEQV VAVAKGAPVK LCDDADYQEY IQKGARFIDS LLHEEGVVYG VTTGYGDSCT VNVSLDLVHE LPLHLTRFHG CGLGETLSIM QARAVMACRL NSLAIGKSGV TYELLKRIET LLNLNIVPVI PEEGSVGASG DLTPLSYLAA VLVGEREVIY QGERQATQAV YAKLNIIPHV LRPKEGLALM NGTAVMTALA CLAFDRAQYL ARLSSRITAM ASLTLKGNSN HFDEILFAAK PHLGQNQIAT WIREDLNHHE HPRNSDRLQD RYSIRCAPHI IGVLQDALPF MRQFIETEVN SANDNPIVDG EGEHILHGGH FYGGHIAFAM DSLKNTVANL ADLIDRQMAL VMDPKFNNGL PANLSGSTGP RRAINHGFKA VQIGVSAWTA EALKHTMPAS VFSRSTECHN QDKVSMGTIA ARDCMRVLQL TEQVAAAALL AMTQGIGLRI AQNELDEASL TPSLAKTLAQ VRGDFETLIE DRPLEAVLRQ TIAKIQAGEW EVCR
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