| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0436 |
|---|
| Symbol | |
|---|
| ID | 5081420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 469357 |
|---|
| End bp | 470646 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640497556 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001181967 |
|---|
| Protein GI | 146291543 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTACAC CCGCTCACGA TTTATCGGCT ATGCCAAATT CACTTGCCGT CGATGTGGCT
ATTATCGGCG CAGGACCTTC AGGCGCCATC GCCGCCAGCT TGCTACACCA ACAAGGTAAA
CGCGTGCTGG TGTTAGAAAA ACAACATTTC CCCCGTTTTT CCATCGGCGA AAGTTTACTG
CCCTGCTGCA TGCAGTTTAT CGAAGAAGCC GGCATGTTAG ACGCACTCAA TGCCGCTGGA
TTCCAGCATA AAAATGGCGC CGCCTTTCGT CGCAATGGCA CTTACACTAC CTTCGATTTT
ACCGATAAAT TTACCCCAGG GCCGGGCACC ACATTCCAAG TGCAGCGCGC CAGTTTTGAT
AAACTGTTAG CCGATACCGC CCAAAGCCAA GGGGTCGACA TCCGCTACGG CGAAACCGTC
GAGGCGATAG ATTTAACCGA GAATCCATGC TTAATGGTGC GCAATGAACA GGGCGAGCTT
TATCAAATCA GCGCCCAATA TGTGCTTGAT GCCAGTGGTT TTGGCCGTGT GTTACCCCGC
TTGCTCGACT TAGAAAGTCC ATCTTGCCTA CCACAGCGCA GCGCCATCTT TACCCATGTG
GAAGACAACA TCAGCGATCC TAACTTTGAT CGAAATAAGA TTTTGATCAG TGTCCACCCT
GAGCATAAAG ACATTTGGTA TTGGCTCATT CCCTTTAGCA ATGGCCGTTG TTCACTCGGC
GTAGTAGCAG AACCGCAATT ACTTGCGCGT TTACAAGGTT CGCTTGAGCA ACAATTGATG
AGCATAGTCA ATGAAGAACC TGGGCTAAAA GCCCTACTGG CAAACGCTAA GGTGGTGCAA
GAATGCGCCA CACTCAAGGG TTATTCCGCC AATGTGTCAC GGCTTGCGAC CGACAAGTTC
GCCCTACTGG GTAATGCCGG CGAGTTCCTT GATCCGGTAT TTTCCTCCGG CGTCACTATC
GCCATGCAAT CGGCATCGAT GGCAGCAAAA TGTGTGACTA AACAACTCAA TGGCGAAACG
GTTGACTGGC AAGCCGATTA CTCAGCGCCT TTAATGCAGG GGGTGAATAC CTTCCGCACC
TATGTGCAAG CTTGGTATGA TGGCCGCTTT CAGGATGTGA TCTTCTATGA AGAACCGAAT
CCACGCATCA AGCAAATGAT TTGCTCGATT CTGGCGGGCT ACGCTTGGGA TCTCAATAAT
CCCTTCGTTA AAGACTCGGA GCGCCGCCTG AACATGGTGG TCGAATTGTG CCAAAACCAA
GTTGCCATTC CTGAATTTGC AGAGGCGTAA
|
|---|
| Protein sequence | MPTPAHDLSA MPNSLAVDVA IIGAGPSGAI AASLLHQQGK RVLVLEKQHF PRFSIGESLL
PCCMQFIEEA GMLDALNAAG FQHKNGAAFR RNGTYTTFDF TDKFTPGPGT TFQVQRASFD
KLLADTAQSQ GVDIRYGETV EAIDLTENPC LMVRNEQGEL YQISAQYVLD ASGFGRVLPR
LLDLESPSCL PQRSAIFTHV EDNISDPNFD RNKILISVHP EHKDIWYWLI PFSNGRCSLG
VVAEPQLLAR LQGSLEQQLM SIVNEEPGLK ALLANAKVVQ ECATLKGYSA NVSRLATDKF
ALLGNAGEFL DPVFSSGVTI AMQSASMAAK CVTKQLNGET VDWQADYSAP LMQGVNTFRT
YVQAWYDGRF QDVIFYEEPN PRIKQMICSI LAGYAWDLNN PFVKDSERRL NMVVELCQNQ
VAIPEFAEA
|
|---|
| |