| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0419 |
|---|
| Symbol | |
|---|
| ID | 5081403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | + |
|---|
| Start bp | 455234 |
|---|
| End bp | 455671 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640497539 |
|---|
| Product | D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| Protein accession | YP_001181950 |
|---|
| Protein GI | 146291526 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
|---|
| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGCGT TAATTCAAAG AGTGAGCCGT GCCAGCGTGG TGGTCGATAA CCAAACCCTA
GGTTCAATTG ATAAAGGCTT GTTAGTCTTG CTTGGGGTTG AGCGGGAAGA TAACCGCGAA
AAAATGGAAA AATTAGCCAC TAAGGTGATG AGTTATCGCG TGTTTTCCGA TGAAAATGGC
AAGATGAATC TCAATTTAGA ACAAGTCGGT GGATCTTTAT TAGTCGTGTC ACAATTTACC
TTGGCCGCCG ATACAGGCAG AGGTTTGAGG CCGAGTTTTT CTGGGGCAGG TACGCCAGAT
CAGGCATTGA CATTGTATGA AGAGTTTGTT GCTTTTTGCC GCGATAAGGG TGTTACTACA
GAAACCGGAC AGTTCGGTGC CGATATGCAA GTGTCCTTAG TCAATGATGG CCCAGTGACC
TTTAATCTGC AGGTGTAA
|
|---|
| Protein sequence | MIALIQRVSR ASVVVDNQTL GSIDKGLLVL LGVEREDNRE KMEKLATKVM SYRVFSDENG
KMNLNLEQVG GSLLVVSQFT LAADTGRGLR PSFSGAGTPD QALTLYEEFV AFCRDKGVTT
ETGQFGADMQ VSLVNDGPVT FNLQV
|
|---|
| |