Gene Sputcn32_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0397 
Symbol 
ID5081381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp430657 
End bp431334 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID640497517 
Producttwo component transcriptional regulator 
Protein accessionYP_001181928 
Protein GI146291504 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TTTTAGTTGA AGATGATGCG ACGACGATTG ATTACATCGT CAAAGGATTT 
CTTGAGCAGG GGCACAATAT CGAAACGGCG AATGATGGCC ACCAAGGTTT ATCTCTCGCC
ACAAGCTGTC AATATGATCT GGTGATCCTC GACCGAATGT TACCCCAGCT TGATGGCTTA
AAATTATTGG CGGCTTTAAG GGCAACGGGT AATCAAACCC CTGTGCTGAT TTTGTCGGCT
TTAGCCCATG TTGATGAACG GGTTAAAGGT TTGCGGGCGG GCGGTGATGA CTATATGACT
AAGCCGTTTG CTTTTTCTGA ACTGTTAGTA CGCGCTGAAA AACTGATGCA ACGTGGTCAA
TCCACGCCCA TTTCGACCGA CTTAGTGGTT GGTGGGCTCA AGATGGAATT ACTGACCCGC
AATGTGACCT TGGACGGACA GGAGTTAATG TTGCAACCTA AAGAGTTTCA GTTGCTTAAG
TATTTGATGG AACATGCTAA TCAGGTCATC AGCCGCACAC TATTATTTGA AGCTGTGTGG
GATTATCACT TTGACCCTCG CACCAATGTA ATTGATGTAC ATATTGCAAA ATTACGGCGT
AAATTTGAGG AGTTAGGTCA CGGAGAGCTG ATTGAAACCG TAAGGGGAGC GGGTTATCGC
TTACGCCAAA GGCATTAA
 
Protein sequence
MKILLVEDDA TTIDYIVKGF LEQGHNIETA NDGHQGLSLA TSCQYDLVIL DRMLPQLDGL 
KLLAALRATG NQTPVLILSA LAHVDERVKG LRAGGDDYMT KPFAFSELLV RAEKLMQRGQ
STPISTDLVV GGLKMELLTR NVTLDGQELM LQPKEFQLLK YLMEHANQVI SRTLLFEAVW
DYHFDPRTNV IDVHIAKLRR KFEELGHGEL IETVRGAGYR LRQRH