Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0378 |
Symbol | |
ID | 5081312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 409863 |
End bp | 410471 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497498 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001181909 |
Protein GI | 146291485 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAGGCG CCATGAAAAC TGAAACTCAA TCCACTCGCC AGCACATTCT GGACATCGGC TATAAGCTGA TTGTACGAAA AGGCTTCTCC TGCGTCGGCC TCTCTTTGCT ATTGCAAGAA GCCGAAGTGC CTAAAGGCTC GTTTTATCAT TACTTCAAAT CCAAAGAACA ATTTGGTGAA GCACTCATCA CTGATTATTT CGAAAAATAT CAGTTAGATT TAGATACATT GTTTAATAAC TCAACACTAA CAGGCTATGA ACGTTTGATG CAGTACTGGC AACAATGGTT GCATGTACAG ACAGATGGAT GCGTCGATCA AAAGTGTTTA GTCGTCAAAC TCAGTGCTGA AGTGGCCGAT TTATCCGAAG CCATGCGCCT GGCTTTACTT CAAGGTTCCG CAGGCATCAT CGACAGGTTA ACCACTTGTG TTCAAGTGGG CATAACCGAT AAATCAATCG CCGAGCAAGA TCCACAATCG ACCGCTGAAA TGTTATATCA CATGTGGTTA GGCGCCAGCT TAATGAACAA ATTAGGCCAC AGTCCTGCCG CGCTCGAACG TGCACTCGTA ACGACTGAAG CCATTTTAAC ACCCAAAACG GTTCCTTAA
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Protein sequence | MLGAMKTETQ STRQHILDIG YKLIVRKGFS CVGLSLLLQE AEVPKGSFYH YFKSKEQFGE ALITDYFEKY QLDLDTLFNN STLTGYERLM QYWQQWLHVQ TDGCVDQKCL VVKLSAEVAD LSEAMRLALL QGSAGIIDRL TTCVQVGITD KSIAEQDPQS TAEMLYHMWL GASLMNKLGH SPAALERALV TTEAILTPKT VP
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