Gene Sputcn32_0378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0378 
Symbol 
ID5081312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp409863 
End bp410471 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content44% 
IMG OID640497498 
ProductTetR family transcriptional regulator 
Protein accessionYP_001181909 
Protein GI146291485 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGGCG CCATGAAAAC TGAAACTCAA TCCACTCGCC AGCACATTCT GGACATCGGC 
TATAAGCTGA TTGTACGAAA AGGCTTCTCC TGCGTCGGCC TCTCTTTGCT ATTGCAAGAA
GCCGAAGTGC CTAAAGGCTC GTTTTATCAT TACTTCAAAT CCAAAGAACA ATTTGGTGAA
GCACTCATCA CTGATTATTT CGAAAAATAT CAGTTAGATT TAGATACATT GTTTAATAAC
TCAACACTAA CAGGCTATGA ACGTTTGATG CAGTACTGGC AACAATGGTT GCATGTACAG
ACAGATGGAT GCGTCGATCA AAAGTGTTTA GTCGTCAAAC TCAGTGCTGA AGTGGCCGAT
TTATCCGAAG CCATGCGCCT GGCTTTACTT CAAGGTTCCG CAGGCATCAT CGACAGGTTA
ACCACTTGTG TTCAAGTGGG CATAACCGAT AAATCAATCG CCGAGCAAGA TCCACAATCG
ACCGCTGAAA TGTTATATCA CATGTGGTTA GGCGCCAGCT TAATGAACAA ATTAGGCCAC
AGTCCTGCCG CGCTCGAACG TGCACTCGTA ACGACTGAAG CCATTTTAAC ACCCAAAACG
GTTCCTTAA
 
Protein sequence
MLGAMKTETQ STRQHILDIG YKLIVRKGFS CVGLSLLLQE AEVPKGSFYH YFKSKEQFGE 
ALITDYFEKY QLDLDTLFNN STLTGYERLM QYWQQWLHVQ TDGCVDQKCL VVKLSAEVAD
LSEAMRLALL QGSAGIIDRL TTCVQVGITD KSIAEQDPQS TAEMLYHMWL GASLMNKLGH
SPAALERALV TTEAILTPKT VP