Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0368 |
Symbol | |
ID | 5081302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 401444 |
End bp | 401935 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640497488 |
Product | protein of unknown function, Spy-related |
Protein accession | YP_001181899 |
Protein GI | 146291475 |
COG category | [N] Cell motility [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000528053 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAA CATTATCTCC TTTGAAAGCA GGTTTATTTG CTATTTTAGC GAGTTCAACC GTATTCGCGA CGACGGTCAG TGCAGAGTCA ACCCAAGGCT GTGATCATTC AAGGGGTGAG TTCCATAAAA AAGGCAACAG AATGGAACAT GGCGGTATGC ATAAAATGTT TGAAGGACTT GATTTAACAG ATGCTCAAAA GGCGGATATT AAAAAACTTT TTGCAGAGCA AAAAGCGTCT CGTTCAGATG AACGTCCAAC GAAAGAAGAG TTGTTAGCAC ATCGTAATGA GATGCAAGCA GTTATCACCG CAGCCACCTT CGATGAAACT CAAGCTAAAG CATTACTCAA TGCTCGGCAA GATAAACGCC AAGCGCAAGC AATTGAACGT ATGAAGATTC AGAATCAAAT TTATAATCTA CTGACGCCAG AGCAACAAGC GAAGTTTAAA GCACGATTTG AAGCACAAGC TGGTAAAGAA CCTCGCGGTT AA
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Protein sequence | MMKTLSPLKA GLFAILASST VFATTVSAES TQGCDHSRGE FHKKGNRMEH GGMHKMFEGL DLTDAQKADI KKLFAEQKAS RSDERPTKEE LLAHRNEMQA VITAATFDET QAKALLNARQ DKRQAQAIER MKIQNQIYNL LTPEQQAKFK ARFEAQAGKE PRG
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