| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0365 |
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| Symbol | |
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| ID | 5081299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 397183 |
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| End bp | 399084 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640497485 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001181896 |
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| Protein GI | 146291472 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0633679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGTTA AACCGCATTT ACCATCGACA CAGGCGTGGC TTGCCGATTC GTGGCAGCGC
AGCATTGGTG CTGGCTTGTC AGAATTTCAG TTACCCCAGG ATCTCAGGCT CGATGCTAGT
GAACTAAAGC AGAAACATGA GCAATATCAA ATGCTCATCG CATTAGTGCA ATCCCATGCC
TTGCCTTTGT TTAATCAGTT GATGGTGCAT TCTAATAGCC GACTCTTGCT CTCCGATGCC
GAGGGTTATG TGCTTAAGCA TTGGGGCGTG AGTCGCTACT CCACAAAATT GGCGGATGTG
GCTTTGGATA TCGGGGTGAA TTGGCTCGAG CAGCACAAGG GCACCAATGC GATAGGGACG
GCACTCACCG CAAAACAAGC GGTCTCTGTA GTGGGTGAGC AACATTTTAT TCGCCAGAAT
CGTTTTATGA GTTGCACTGC TTGCCCGATA TTTTCCCCCC AAGGTGAGAT GCTCGGGGTG
ATTGATATCA CCAGCGAGCA GCAAAGGCAC ACTCAGCAGA CGCTAATGTT AGTGTCCAGT
TTGGCACAGC AGGTCGAGAC CGCGCTTTTG TGCCATCTGC CCGATAGTCA TTATCGAATC
GATTTAGCGG CGCAGCCCAA TCTGCTCAAT TCGGGTTGGC AGGGTATAGT GATTGCCGAT
AGCGATGGCC GCATCGTAGG TTGTAATCCC ATGGCGAAAC AATTGCTTAA TCATGCCAAG
GTGGGCGATG CTGTCGAACA GTACTTAGGC GATAATTGGA GCCGTGTGGG TGGCTTTAAT
CAACATTTAG CTTTGCATTT ACAGACTCAA TCCTTAAATA TTCCCAGCGC TAAGGGTCGA
GTTGCGATTA GCAATAAATC GCTCAATCAA TTGGGGGTTC GGTTTCGCGA TCCTCAATTA
GAACGCGCTT GGCAACATGC CAATAAGGTG ATCACCAAAC AAATTCCGCT GTTAGTGCTC
GGAGAAACGG GCGTCGGTAA AGAGCAGTTT GTTAAAAAGC TCCATGCCCA GAGTGCACGT
CGCACCGAGC CTTTAGTGGC AGTGAACTGC GCCGCATTGC CCGCCGAGTT AGTCGAATCT
GAACTTTTTG GTTATCAGGC AGGCGCTTTT ACTGGGGCAA ACCGCACTGG ATTTATCGGT
AAAATTCGCC AAGCCCACGG CGGCTTTTTG TTTTTAGATG AGATCGGTGA AATGCCGCTG
GCGGCCCAGA GTCGTTTACT CAGAGTATTG CAAGAGCGCG AAGTGGTACC CGTTGGCAGT
AATCAAAGTT TTAAAGTCGA TATCCAAATC ATTGCTGCAA CCCATATGGA TTTAGAAAAG
CAGGTGGCGC AAGGGCTGTT TCGACAGGAT TTGTTCTATC GATTGAATGG TCTGCAAGTA
CGTTTACCTG CGCTGCGTGA GCGGCAGGAT ATCGAGCGTA TTATCCATAA ATTGCATCGT
AAACATCGTA TCGCCGCGCA GGATATCTGC CCAGAACTGT TAGGGAAAAT GATGCAATAC
GATTGGCCGG GGAATTTGCG TGAGCTGGAT AATCTCATGC AAGTCGCTTG CTTGATGGCA
GAAGGAGACA ATACCCTCAA TTGGCAACAT TTACCCGATT ATCTGGCGGC CAAACTCACA
TGCGAGCCGT TAAAAGGAGA CCTGTTACAA GCTGCATCTT TATGTGAAGA ATTTAAAGAG
GTAAGTGGTC AACCTTCTGC ATCACCCCTG CCAAGTGCTA AGTTCGCTGT GGAGCCGAAT
GTCACAAAGG TTCAATCGGA TTCCCTAAAT GAGGCGATTT ATAGCAATGT GCAGCAGGCA
TTTCAGGCCT GTAATGGCAA TGTGAGCCAA TGCGCTAAAC GCTTAGGGAT TAGCCGTAAT
GCCTTGTATC GTAAGTTGAA ACAGATGGGA CTTAAAGCTT AG
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| Protein sequence | MTVKPHLPST QAWLADSWQR SIGAGLSEFQ LPQDLRLDAS ELKQKHEQYQ MLIALVQSHA
LPLFNQLMVH SNSRLLLSDA EGYVLKHWGV SRYSTKLADV ALDIGVNWLE QHKGTNAIGT
ALTAKQAVSV VGEQHFIRQN RFMSCTACPI FSPQGEMLGV IDITSEQQRH TQQTLMLVSS
LAQQVETALL CHLPDSHYRI DLAAQPNLLN SGWQGIVIAD SDGRIVGCNP MAKQLLNHAK
VGDAVEQYLG DNWSRVGGFN QHLALHLQTQ SLNIPSAKGR VAISNKSLNQ LGVRFRDPQL
ERAWQHANKV ITKQIPLLVL GETGVGKEQF VKKLHAQSAR RTEPLVAVNC AALPAELVES
ELFGYQAGAF TGANRTGFIG KIRQAHGGFL FLDEIGEMPL AAQSRLLRVL QEREVVPVGS
NQSFKVDIQI IAATHMDLEK QVAQGLFRQD LFYRLNGLQV RLPALRERQD IERIIHKLHR
KHRIAAQDIC PELLGKMMQY DWPGNLRELD NLMQVACLMA EGDNTLNWQH LPDYLAAKLT
CEPLKGDLLQ AASLCEEFKE VSGQPSASPL PSAKFAVEPN VTKVQSDSLN EAIYSNVQQA
FQACNGNVSQ CAKRLGISRN ALYRKLKQMG LKA
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