Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0357 |
Symbol | |
ID | 5081291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 391312 |
End bp | 391971 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640497477 |
Product | two component transcriptional regulator |
Protein accession | YP_001181888 |
Protein GI | 146291464 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTGC TATTGATTGA AGATGATACC GATCTGGTTG CGCGCCTCAT TCCCGCCCTT AACGAGGCGG GTTATACCGT CGAGCACGCC GATAACGGTA TTGATGGCGC CTTTTTAGGC GAAGAAGAAA ACTTCGAAGC CGTGATCCTC GATCTCGGCT TACCCGGCAA ACCCGGTTTA CAAGTCCTCG GCCAATGGCG ACAAAAAGGC TTAGCTATGC CAGTGCTGAT CCTCACCGCC CGCGATGCGT GGCACGAGCG GGTCGACGGC CTCAAGGCGG GTGCCGATGA TTACCTCGGC AAGCCTTTTC ATATTGAAGA ACTACTCGCA AGGCTCGAAG TGTTGATCCG CCGCCACTTT GGCCGTGCCG ACAATGTGTT GCAGCATGCA GGCGTCTCCC TCGATGTCGA CAAACAAGCC GTCACTAATG TTGATGGTGA AGTGATAGAA CTGACTAAGA TTGAATATCG TCTGCTGCAT TACTTAATGG TCAATCCCAG CAAGATCGTC TCTAAGTCAG AGCTCAGTGA ACGCATTTAC GAAGAAGATC AAATCAAAGA CAGCAATGTC ATCGAAGTGT ACGTCAACCG CCTGCGCCAA CGCTTAGGCA AGGATTATAT CGAAACCCGC CGCGGCCAAG GTTATCGACT CAAGGAGTAA
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Protein sequence | MRLLLIEDDT DLVARLIPAL NEAGYTVEHA DNGIDGAFLG EEENFEAVIL DLGLPGKPGL QVLGQWRQKG LAMPVLILTA RDAWHERVDG LKAGADDYLG KPFHIEELLA RLEVLIRRHF GRADNVLQHA GVSLDVDKQA VTNVDGEVIE LTKIEYRLLH YLMVNPSKIV SKSELSERIY EEDQIKDSNV IEVYVNRLRQ RLGKDYIETR RGQGYRLKE
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