| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0356 |
|---|
| Symbol | |
|---|
| ID | 5081290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 389991 |
|---|
| End bp | 391307 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640497476 |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001181887 |
|---|
| Protein GI | 146291463 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATTCAC TCAAGGGTTA TCTGACGCGC AATCTGCTGA TCACGCTCAC CTTTGCCATG
GTGCTGTTAT TGTATTTTCT ATACCAAGGC ATCCAAATAT TAACCCAAGA CTTTGTCGCT
TCGCGTCTAC AACACGATGC CGACAGCCTG ATCTCCGCCC TGAATCATAA TCCCGATGGC
ACATGGGCGC TCACCACAGA CCGCTTGCCC AATGTGTACC ACAGGGTTAA TTCTGGGCAT
TATTTTGCGA TTCAAATCGG CGAGCAAACT CTGCGTTCAC GCTCCCTATT CGACCATAAC
GTGAACATGC CTAAACTGAC CGCTGGTGAG CAACACCAAG CCACTGAGTT TGTCAGCAAA
GAGCATTGGC TGATGTTCAG TCAGGCCGTT ATCAAAGATG ATCAATTAGT TACCCTGTGG
GTGACAGAAG ATATTAGCTC GCTTGAACAA ACCCAAGTGC AGTTTTTAGC CTTTGCCAGC
GCAGCCGTGT TACTCACGAT TGTCATTCTA TTAATAGCAC AGTATCAATT ACTTAAACGC
GGTTTTAAAC CCTTAGAGCA GATGCCAGAA GCTATCCGGC AGATGCGCAC CCAAGGGCAA
GAAATCAATC CTGACCAAGT GCCAAGCGAG ATAGTCCCAC TGATCGAAGA GATAGATCGT
TTAGTCAATC AATTGGGCCA AAGAGTACAA CGCTCCCGTA ATGCCTTGGG TAACTTAGCC
CACGAAATGA AACGTCCGTT ACAAGGGCTG CAGTCCTACC TAGAAAGCCT TCCACTAGAA
CAGCGGAGTG AGGGCAGCAA GGTGCTCGCA AACCTGCACC ACATCATTGA GAGAGAGCTT
AAGCGCACTA AGATAGTCGG CCTGTCTACT CCGGGGCGTT ATACCGTACT CGATGACGAT
CTCGCGCCGC TGATTCAAGT GATGCAGCGC ATCTACCCAG ACCGTATTAT TCACAGCCAT
TACGCGAGCG GCTTAGTGAT GCCGTTTGAC CGGGATGACT TACTCGAACT CTTAGGCAAC
TTGCTGGATA ATGCCTGCAA GCATAGCCGC AAGAACATTG AGATCCATAT CAGTCAGCAA
AACGTGCCAG CTACTGGCTA TGGGATAGAA GTGAGTGATG ATGGCGAAGG CGTCTCCGAT
GCCGCGCTGT CCGTTATCAT TGAGCGCGGC ATTCGGCTAG ATGAAAGCAT CCAAGGCCAT
GGCTTAGGAT TGTCTATCTG CAAAGATATC GTCGACAGTT ATCAGGGCGA ACTCAGCTTT
AGCCACGCGA AACAAGGTGG ACTCAAAGCC AGCGTATTTC TACCGCTCCC GAGTTAA
|
|---|
| Protein sequence | MYSLKGYLTR NLLITLTFAM VLLLYFLYQG IQILTQDFVA SRLQHDADSL ISALNHNPDG
TWALTTDRLP NVYHRVNSGH YFAIQIGEQT LRSRSLFDHN VNMPKLTAGE QHQATEFVSK
EHWLMFSQAV IKDDQLVTLW VTEDISSLEQ TQVQFLAFAS AAVLLTIVIL LIAQYQLLKR
GFKPLEQMPE AIRQMRTQGQ EINPDQVPSE IVPLIEEIDR LVNQLGQRVQ RSRNALGNLA
HEMKRPLQGL QSYLESLPLE QRSEGSKVLA NLHHIIEREL KRTKIVGLST PGRYTVLDDD
LAPLIQVMQR IYPDRIIHSH YASGLVMPFD RDDLLELLGN LLDNACKHSR KNIEIHISQQ
NVPATGYGIE VSDDGEGVSD AALSVIIERG IRLDESIQGH GLGLSICKDI VDSYQGELSF
SHAKQGGLKA SVFLPLPS
|
|---|
| |