| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0353 |
|---|
| Symbol | |
|---|
| ID | 5081287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 386583 |
|---|
| End bp | 387323 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640497473 |
|---|
| Product | fumarate reductase iron-sulfur subunit |
|---|
| Protein accession | YP_001181884 |
|---|
| Protein GI | 146291460 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGC ATAATATTCA GACGGTTAAT ATCCTTCGAT ATGATCCAGA AAGGGACAAT
GAACCCTTCT TGGAGACGTT CAAAGTCCCT GCGGATAACA CAACCTCCAT ACAAGATGCA
TTAACTTACA TTAAAGATCA TATGGATAAA TCTTTATCCT ATCGCTGGTC TTGTCGCATG
GCGATTTGTG GCTCCTGTGG CGTAATGGTT AACAAAGTGC CTAAATTGGC CTGTAAAACC
TTTTTACGCG ACTACCCAGA AGGTATCACG CTTGAGCCAC TCGCTAACTT CGCCATTGAA
AAAGATCTGG TGGTCGACAA AGCCCCCTTC CTTGAGCGAT TAGAAGCAAT GAAACCTTAT
ATCATTGGTA ACGATCGCAA ACCCGAAGAT GGACCAAATC GACAAACGCC AGCACAAATG
GCGAAATACA AGCAGTTTGC AGGCTGTATC AACTGTGGTT TGTGCTATGC AGCTTGTCCG
CAATTTGGTT TGAACCCAGA ATTTATCGGC CCAGCGGCCA TTACGCTGGC CCACAGATAT
AACTTAGATA GTCGCGATCT GGGCAAAGTC GAACGGATGA AGCTTATCAA CGGTAAAGAC
GGTGCTTGGG GTTGTACCTT CGTTGGATAT TGTTCAAAGG TATGTCCAAA GCATGTCGAT
CCTGCGGCGG CCGTAAACCA GAGCAAGGTC GAGTCAGCTA AAGACTTTCT CATTAATATG
ATAACGACAA AGGAGGCATA A
|
|---|
| Protein sequence | MTEHNIQTVN ILRYDPERDN EPFLETFKVP ADNTTSIQDA LTYIKDHMDK SLSYRWSCRM
AICGSCGVMV NKVPKLACKT FLRDYPEGIT LEPLANFAIE KDLVVDKAPF LERLEAMKPY
IIGNDRKPED GPNRQTPAQM AKYKQFAGCI NCGLCYAACP QFGLNPEFIG PAAITLAHRY
NLDSRDLGKV ERMKLINGKD GAWGCTFVGY CSKVCPKHVD PAAAVNQSKV ESAKDFLINM
ITTKEA
|
|---|
| |