Gene Sputcn32_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0349 
Symbol 
ID5081283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp383302 
End bp383979 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content44% 
IMG OID640497469 
Productresponse regulator receiver 
Protein accessionYP_001181880 
Protein GI146291456 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATTG AGGATGATCC CAAGGCCAGT TATGCCTTGG AATCCATCAT TCACCAACAT 
CCAGATTTTG AAGTCGTTGT CGTCAGTGAA ACCTATCAAG ATGCTCTGAT GCACTATGAC 
CTCTATAAAC CCCAGCTGGT TTTTGTGGAC ATCACCCTAC CCGATGGCAG TGGCATAAAT 
GTCATCAAAC AACTGCGCAG TCAAGGCGCT AATTGTTATT TTATTATGAC CACCGCTGAG 
CGCGAGGCCA CAACCGTTGA GCAAGTAGTT CAACTCGGTG TGAGTGATTA CCTTGTAAAA 
CCACTGCGCA TGTCGAGGGT TCGCCAAGCT CTTGATGATT ACAAGCTGTA TCGACAAAAA 
TTGGCATGCC ATGAAACCAT GGACCAATGT GTGATTGACC ATATCCTAGG CAAGCGCACA 
AATCTCCCTA TGCGGCGAAC ACCAAAAGGA ATCGATGCCA ATACTCTCGA TACGCTAAAA 
GATATCTTAA GAAAAGAACA ACTCACTGAA TTTTCTGGGG ATGATATTAG TGATCGTATG 
AATGTTAGTC GCATCACTAT CCGCCGCTAT CTGGAATATC TTGAATCAGA GGGGGTGATA 
AAAATGGTAT TGAACTATAA AACGGGTGGA CGCCCCAGTA GAGTCTATCA ATTGATTGAT 
GTGGATTTGC TTGGCTAA
 
Protein sequence
MIIEDDPKAS YALESIIHQH PDFEVVVVSE TYQDALMHYD LYKPQLVFVD ITLPDGSGIN 
VIKQLRSQGA NCYFIMTTAE REATTVEQVV QLGVSDYLVK PLRMSRVRQA LDDYKLYRQK 
LACHETMDQC VIDHILGKRT NLPMRRTPKG IDANTLDTLK DILRKEQLTE FSGDDISDRM 
NVSRITIRRY LEYLESEGVI KMVLNYKTGG RPSRVYQLID VDLLG