| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0332 |
|---|
| Symbol | |
|---|
| ID | 5081211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 357483 |
|---|
| End bp | 358052 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640497448 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001181863 |
|---|
| Protein GI | 146291439 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACTA TGAAATTTTT GTGTGATACC AAGCGCTGCA TCGAATGTAA CGGTTGTGTC
ACAGCCTGTA AAAACGAAAA CGACTCCGCT CTCGAGTGGG GGATCCAACG CCGCCGCGTA
GTCACAATCA ATGACGGTCA ACGTGGTGAA GCATCCATCT CTGTCGCTTG TATGCATTGC
TCAGACGCAC CCTGTATGGC AGTTTGTCCA GCAAACTGTT TCTACAGAAC CGATGACGGC
ATAGTGCTAC ATAATAAAGA TGCTTGTATT GGTTGCGGTT ATTGCTTGTA CGCTTGTCCA
TTTGGCGCAC CACAGTTCCC GAAAAAAGGT GCCTTTGGTA GTCGCGGTAA GATGGATAAA
TGTACATTCT GTGCCGGTGG CCCAGAAGAA AACCACTCAG ATGCCGAACG CCAAAAATAC
GGTGCAAACC GTATTGCCGA AGGCAAGCTA CCTATGTGTG CAGAACTGTG TGCCACTAAA
GCCCTGCTAG CGGGTGATGC TGAAGTGGTT TCAAGCATCT TCCGTGAGCG TATGGCTTAC
CGTGGTGCTA AAAACGCGGC TTGGAATTAA
|
|---|
| Protein sequence | MATMKFLCDT KRCIECNGCV TACKNENDSA LEWGIQRRRV VTINDGQRGE ASISVACMHC
SDAPCMAVCP ANCFYRTDDG IVLHNKDACI GCGYCLYACP FGAPQFPKKG AFGSRGKMDK
CTFCAGGPEE NHSDAERQKY GANRIAEGKL PMCAELCATK ALLAGDAEVV SSIFRERMAY
RGAKNAAWN
|
|---|
| |