| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0321 |
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| Symbol | |
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| ID | 5081200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 342936 |
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| End bp | 344390 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497437 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001181852 |
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| Protein GI | 146291428 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.845826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACTA AGGTTGTGAT AAAGGATAGT GATTTTATCC AAGGTTTTTC CGCCAATCTT
GTCGATGATT ACCTCTGTGC AAAAAATTAT GTTAAGGACG TACCGACTCA GTCATTACTG
CATATTCGCA GTTTTACACA TAAGCTGACC GAGTTGTTGG GGCAAGATAA GCGGATTGAG
TTCTCAAGCC CCAATTTGTA TGACCGTATC GAGCAGTTAA ACCAAAAACG CCTGATTGAT
GTTAAAACAA CCCGTGCCTT ACACCGCTTA CGTGCCGACG GTAACCGTGG CGCCCATCCA
GAAAAATATC ATCTTACCCA AGAGCAATTA CTCGCTTTAG CCCAAAAAAC GATTAAAGAT
GTACTGACAT TAGTTGAGCA CTTATATCCT AAGGTGGCAG GATGTGTTGC TCCTAGGTAT
CAATACAAAG CGAGTGATTC AGTAACGGTT AAAGACCTCT GCTATCGCGC TGTGATGGAA
GATGATCCTA ATGCTCAATA TTTGGTAGGT ATTTCGCTAA AAACAAAGGC TTTTATGCTT
AAGGATCAAG CGCTTTCTTG GGCTGATCAA GCCGATGATG TTTTGGCCAC GCATGCGGAG
TTAACTAATA ATGTGAGTGC CCAAGCGGCG GATACTTTTG CGAAGGCGGC TTATTGGTTT
TCCCTTGCGG CACCCAAAAA TATGGACGCT TTGTACGAAC ATGGCGTTGC ACTGATCCAC
GGTTATCAAG GCGTGCCAGA TATTGCTAAG GGAGAACAAG CTATTGCTGT TGCGGCAGAG
GCCGGTGTTG TTAATGCGAT GGCACTTTTA GGGTATTTTT ATCTAGTGGG CAGTGAGTCA
TTGGCTCAGG ATTTAGAGCT AGCGCAGCAA TATTTACAGC GTGCAGCCGA TGGTGAACAA
GCGGAGGCCA TGGCAAACCT TGGCGTATTA CATTATCAGC GTGAAGATTT GACTCAAGCC
TATCACTTTA TTCATAAAGC GGCGCAGGCT GGCTATCCCC ATGCCCAGTA TCATCTGGCA
TTAATGCTCG CTAATGGCGA GGGTTGTTCT CGAGATCCTA TCGCTAGCGA ATATTGGATG
GCTGAAGCCG CAGAGCAAGG ACAGTTAGAT GCCATGTTTA TGCGGGCACA ACATATGCTC
AACGATGACA ATGCATTCGG TAGCGATTTA ACCCAAGCTG AGCATTATTT GCGTGAAGTG
ATCAAATATG GTCATAGCGT TCCTGCAATG ATAGAGCTGA GTATGGCATT AGCTGATGGG
ATGTTGGGCA GAATTGATGT GGTTGGTGCA GCGGCATTAC TGAATTTAGC TCGGCGTTAT
GCCAATGAAA AGGAGGCTGA GATTATCGAA CCTCTTTGGC TTTCATTGGC ATTACAAGTA
GATAAGGTAC TCGAAATGAC AGTCGATCCC GCAGAGATCC ACAGCCTTAA GCGCGCGCAG
ACTTTACTTG CCTAA
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| Protein sequence | MATKVVIKDS DFIQGFSANL VDDYLCAKNY VKDVPTQSLL HIRSFTHKLT ELLGQDKRIE
FSSPNLYDRI EQLNQKRLID VKTTRALHRL RADGNRGAHP EKYHLTQEQL LALAQKTIKD
VLTLVEHLYP KVAGCVAPRY QYKASDSVTV KDLCYRAVME DDPNAQYLVG ISLKTKAFML
KDQALSWADQ ADDVLATHAE LTNNVSAQAA DTFAKAAYWF SLAAPKNMDA LYEHGVALIH
GYQGVPDIAK GEQAIAVAAE AGVVNAMALL GYFYLVGSES LAQDLELAQQ YLQRAADGEQ
AEAMANLGVL HYQREDLTQA YHFIHKAAQA GYPHAQYHLA LMLANGEGCS RDPIASEYWM
AEAAEQGQLD AMFMRAQHML NDDNAFGSDL TQAEHYLREV IKYGHSVPAM IELSMALADG
MLGRIDVVGA AALLNLARRY ANEKEAEIIE PLWLSLALQV DKVLEMTVDP AEIHSLKRAQ
TLLA
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