| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0318 |
|---|
| Symbol | |
|---|
| ID | 5081197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 340918 |
|---|
| End bp | 341376 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640497434 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001181849 |
|---|
| Protein GI | 146291425 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4103] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.355873 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCGA AACTAAAGCG ATTTATTCAA TCACACACCC AAGCCGTCTC CCCTGAAGAT
AAGGCGCATC AGCTTAAATT AGCCGCAGCC AGCATGTTAT TAGAAGTCGT TTTTGCCGAT
GAAACATTGG CCGCTGAAGA AATGGCACTG TTGCCTAAGC TCCTTACCGA TACCCTGTCG
ATGACAGATG ACGATGCCAA CGCTCTTATC GATGATGCTA AACAAGTACA AGGTAATGCA
ACATCACTCT TTGAATTTAC GAGCGCTATC AATGCCGAAT TTAGCCTAGA GCAAAAGCAA
CAACTGTTAT TGGCAATGTG GCAACTCGCT TATGCCGATG GACAATTATC CCAATACGAA
GACCAAATTA TTCGCCGTAC CGCTGACTTG TTGTATCTCA AGCACAGTGA ACTTATCCAG
ATGCGCAACC TTGCGATGAA GTCAGTCAGG GATAACTAA
|
|---|
| Protein sequence | MIAKLKRFIQ SHTQAVSPED KAHQLKLAAA SMLLEVVFAD ETLAAEEMAL LPKLLTDTLS
MTDDDANALI DDAKQVQGNA TSLFEFTSAI NAEFSLEQKQ QLLLAMWQLA YADGQLSQYE
DQIIRRTADL LYLKHSELIQ MRNLAMKSVR DN
|
|---|
| |