Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0309 |
Symbol | |
ID | 5081188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 331994 |
End bp | 332782 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640497425 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001181840 |
Protein GI | 146291416 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAACCA TGGCCCGTTA CGGTGAAACA TCACTACCGG TCTTAGTATT ACTACACGGT TTTTTAGGTA CTAAGGCTGA CTGGTTGCCG TTAATGCCAG TGCTAAGTCA GCACTTTCAT TGCATTTGTG TGGATCTGCC AGGCCATGGT GATAATCAAG ACGAGTTAGC GCCAACCGAG TTGGAGGGAT TTAGCCAATG TGTGGAAAAT GTGATCGCAC ACCTTGATGG GCTCCATATA GGTCAATTCC ACCTTTATGG CTATTCTCTC GGTGGCCGTA TTGCTCTTCA CCTTGCCAAT ACTTACCCAC AAAGGTTACT GAGCTTAACC CTCGAATCCT GTCATCCGGG GCTAGATGAT CTGGAAGAAA AAACCACCAG AGCCAGTAAT GATGCACTGT GGGCAGATCG TTTAATGAGA TTAAGTAGCA AAGAGTTTCT GGCCTTGTGG TACCAACAGG CGGTTTTCGC CGATATGGGC ACAACCAAAC GCCAAAGTCT GATTGATTTA CGCACAAAAG CATTAGATCA ACACCCCAAA CAAAAACTAC AACAGATCTA TCTTGCGACT TCACTTGCCA AGCAAGCATC CCTGTGGAAT GTCCCTTCAC AATTAACCTG CGAATGCCAT TTTTTTGCGG GCACTGAAGA TAGTAAATTT TCGGCCATTG CCGAAAAATG GCAACAGCAA GCGCCTATTC TCCTCCATAG CATTCACGGC GCAGGACACA ACATACACCA AATGGCACCC GCTGCATTAA TCTCAAAAAT CGTGGCCTTG CTAGGGTAA
|
Protein sequence | MPTMARYGET SLPVLVLLHG FLGTKADWLP LMPVLSQHFH CICVDLPGHG DNQDELAPTE LEGFSQCVEN VIAHLDGLHI GQFHLYGYSL GGRIALHLAN TYPQRLLSLT LESCHPGLDD LEEKTTRASN DALWADRLMR LSSKEFLALW YQQAVFADMG TTKRQSLIDL RTKALDQHPK QKLQQIYLAT SLAKQASLWN VPSQLTCECH FFAGTEDSKF SAIAEKWQQQ APILLHSIHG AGHNIHQMAP AALISKIVAL LG
|
| |