| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0300 |
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| Symbol | |
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| ID | 5081127 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | + |
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| Start bp | 317329 |
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| End bp | 319881 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640497416 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001181831 |
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| Protein GI | 146291407 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTGGA TAAACCTTTT TATGGATAAA AAAATTAAGC TGCGACTATT ACCCTTGTTG
CTGCTATCGG CCCCTCTTTA TGCCGATGAC ATGGAATATA CTTTTGACGA AGCGTTGTTA
TTAGGGCCGG GTTATAACTC CGATTATTTA CAGCGCTTGG CAAATGGTCC CGATATTTTG
CCTGGCCAGT ATCAGGTTGA TCTCTTTATT AACGGTCGTT TTGTGTCTAG AGAGCTTTTG
CAATTTATTG AACTTAGCGA TAACAAAGTA GAGCCTTGCA TTGAAGAGGC TATCTGGACC
AAAGCTGGCG TACGTCCTGA ATTTATGGCA CCAGCCCCTA TCACTGGCGG CTGTAGTTTG
GGCTATACCG TTAAGGGCAA TAATTTTAGT TTTGATTCTG GCAGCTTAAG GCTCGAGCTA
ACTGTGCCTC AGGCATATAT GGATAACAAA CCTAGGGGTT ATATTTCTCC AGATGAATGG
GATAGTGGCG AGACCGCGCT TTTTGTTAAC TACAGTGGTA ACTACTATCG TTCTGAGTCC
AGTTATGGTC GTCGTAGCAC GAGTGAGTCA GGTTATCTTG GGCTTAGTTC TGGCTTTAAC
TTAGGGCTAT GGCGTATACG TAACCAATCG ACTTACCAAT ATAGAGACTC AGGCTTTGGC
TCTGATAGTC AGTTTGATTC CTTAAGAACC TATGCCACCC GAGCTTTGCC TTTCTGGCAA
TCGGAGTTGT CATTGGGCGA GCTTTATACC CGTAGTACGG TATTTGGCAG TATTAGCTTT
AAGGGATTTC AGATCCAGTC TGATACACGC ATGTTACCCG TATCACAGCG TGGTTATGCG
CCAACAGTCA CTGGTATCGC GCAAACCACG GCTAAGGTAG TGATTAAGCA AAACGGCCGT
GAGATATACC AAACCACAGT TGCTGCAGGC CCATTTGAAA TAAATGACCT TTATCCTACC
AACTATCAAG GGGATTTATT GGTCGAAATA ACCGAGGCTG ATGGCAGAGT CTCGTCTTTT
ACTGTGCCTT TTAGTGCTGT ACCCGGCTCT ATGCGCGCGG GCCAATCCCA ATACGCGCTT
TCCATGGGTA AAAGTATCGA TACAGGTGAG GACGGTTACT TTACTGATTT TACCTATGAG
TTAGGTTTAT CTAATGCCAT GACATTTAAC TCAGGTTTAC GGATAGCTAG TGGTTATGTT
GCTGCGAGTG CGGGGAGTGT ATTCACTACG CCTATTGGCG CTATTGGGGC TACAGGGGTG
TATTCGCATT CTAAACTGAA ACCTGAACTG GGTGATGTTG AAACGGATTC GGGCTGGCGC
CTTGGCCTAA ACTACAGTCG TGCCTTTGAA AGTGGTACAT CCGTCACTTT AGCAGGCTAT
AAGTACTCCA CCGAAGGCTT TAGGGAGTTA AGCGATATTT TCCGCCAGCG CGCCTACTTA
GATAATGGCT ATGACTATAG CTCTGAAAAT TATCTACAAA AGGCTGAAAT GGTGCTCAGT
ATGAGCCAAC ATTTGGGTGA TTGGGGTTCT TTGGCTGTTT CAGGTTCTAA GCGTCAGTAT
CGTGATGGAA GGGACGATGA TGAGTCATAC CAAATGGGTT ACTCGAATCA ATTTGGCCTT
GTCAGTCTAG GGGTAAATTA TTCGCGTCAA TACTTAAACC AAACAGAAAA CAGCATCGCT
GGCCCTATTC CGGTCAAAAC CAAAGATGAT GTCTGGTCAT TAAGTTTATC GGTTCCACTA
GGGGCTAGCA GTAACCATGC GGCATCAACG GGTTATAGTA ATAGCGGTGA CAGTAATAAT
TACTATGCTG GCATCTCTGG CATGCTTGAT GATGATCGTA CATTAAGTTA CTCCTTAAAC
GCGAGTCGCT TAGATGATAA CGATTTTAGC GGTAACAGTT ATAGCGCAAC GCTCAATAAG
CGCATGAGCT TAGCGAGTAT GGGCCTTAAC TATTCTCGTA GTGATAGCTA TCAACAGTGG
GGGGGCAATA TTCGTGGTGC CGTGGTGGTG CATGAAGGTG GGTTAACCCT AGGCCAGTCA
GTGGGTGAAA CCTTTGCCAT TATTGAGGCT CCTGGGGCCG AAGGGGCTGC AGTCAAAAAT
AACTGGGGCA CTTATATTGA TAGCAATGGC TATGCTTTGA TGCCAAGTTT AATGCCTTAT
AGATCCAATG ATGTGAGTTT AGATTCAGCG AATATTGATG AAGATGTTGA GTTAGTGGAT
TCACGTAAAA CCGTCACGCC CTATGCAGGC GCTGCGGTAA AACTGAAGTA TGAAACCCGC
AAGGGCAAAG CGGCACTCTT TATTGCTAAG CTTGATTCGG GTGAGGTCGC GCCTTTAGGG
GCAAACATAC TCGGCTCACT GGGAGAAAAT ATCGGCACAG TTGGGCAGGC AGGGTTAGCC
TATGTTCGGT TAGCGGAGCC CGTAGGTAAG CTCACCCTAA AATGGGGGGA GAGACGTGAA
GATAGCTGTC AAATCCATTA TGACTTAACC GAGCAACCAA CGGATGTACG TTTGCACCGT
TTGCCCACGG TGTGTACTGT GGCAACTAAT TAG
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| Protein sequence | MPWINLFMDK KIKLRLLPLL LLSAPLYADD MEYTFDEALL LGPGYNSDYL QRLANGPDIL
PGQYQVDLFI NGRFVSRELL QFIELSDNKV EPCIEEAIWT KAGVRPEFMA PAPITGGCSL
GYTVKGNNFS FDSGSLRLEL TVPQAYMDNK PRGYISPDEW DSGETALFVN YSGNYYRSES
SYGRRSTSES GYLGLSSGFN LGLWRIRNQS TYQYRDSGFG SDSQFDSLRT YATRALPFWQ
SELSLGELYT RSTVFGSISF KGFQIQSDTR MLPVSQRGYA PTVTGIAQTT AKVVIKQNGR
EIYQTTVAAG PFEINDLYPT NYQGDLLVEI TEADGRVSSF TVPFSAVPGS MRAGQSQYAL
SMGKSIDTGE DGYFTDFTYE LGLSNAMTFN SGLRIASGYV AASAGSVFTT PIGAIGATGV
YSHSKLKPEL GDVETDSGWR LGLNYSRAFE SGTSVTLAGY KYSTEGFREL SDIFRQRAYL
DNGYDYSSEN YLQKAEMVLS MSQHLGDWGS LAVSGSKRQY RDGRDDDESY QMGYSNQFGL
VSLGVNYSRQ YLNQTENSIA GPIPVKTKDD VWSLSLSVPL GASSNHAAST GYSNSGDSNN
YYAGISGMLD DDRTLSYSLN ASRLDDNDFS GNSYSATLNK RMSLASMGLN YSRSDSYQQW
GGNIRGAVVV HEGGLTLGQS VGETFAIIEA PGAEGAAVKN NWGTYIDSNG YALMPSLMPY
RSNDVSLDSA NIDEDVELVD SRKTVTPYAG AAVKLKYETR KGKAALFIAK LDSGEVAPLG
ANILGSLGEN IGTVGQAGLA YVRLAEPVGK LTLKWGERRE DSCQIHYDLT EQPTDVRLHR
LPTVCTVATN
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