Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0289 |
Symbol | |
ID | 5081116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 304982 |
End bp | 306430 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640497406 |
Product | signal recognition particle-docking protein FtsY |
Protein accession | YP_001181821 |
Protein GI | 146291397 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0552] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00064] signal recognition particle-docking protein FtsY |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000644129 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGA AAGGTTTTTT CTCTTGGTTT CGTAAAGATA AGTCACAAGA TGAGGTCGTC GCAGAAACGC CAGTTGTTAC TCCAACACAA GATACTGCTG ATGCAACAGA GCGTTTAGCA CAGCAGGAAC AAGCTGAGGT GCAACTGGCT ATAGAGGTCG AAGCTCACGC TCATGCTGAA AAACAGGCCG CGGAACAATT AACTGCCGAA CAAGCACAGG CAAAAACCGA AGCAGAGCAG TTTGCCGTAG AGCACGCTCG AATTGAAGCG CTGGACTTCG CTAAACAGCA AGCCGAAGCA ACACGTTTGG CCACAGAACA ACTCAGGGCC GAAAAGCATG CAGCTGAGGA CTTAGCCGTC GCACAGTTAG CTGCAGAGCA ACGCATCGTA GAACAATTGG CAGCACAGCA GTTAGCGGCC GAGAAAGCCG CTGCAGAGCA ACTAGCTCAA GCTGAAACTG CACAAGCTGT TGAGCCCGCG GCCGAATTAC AACCAGAGCC GCAGGAAAGA CCCGTTAAGG AAGGATTATT TGCTCGCCTG AAACGCGGCT TGATGCGTAC CAGCGAGAAT ATTGGCAGTG GTTTTATCGG CCTATTTCGC GGCAAGAAAA TTGACGATGA TCTGTTTGAA GAACTCGAAG AACAATTATT AATCGCCGAC GTTGGCGTCG AAACTACCAC GCGATTAATC AATAAGTTGA CTGAACATGC CTCACGTAAG CAGCTTAAAG ATGCTGAGGC ACTATATGAT TTACTGCGTG ATGAGTTGCA AAAAACACTC GATCCCGTCG CTATTCCGTT AGTGCCCAAT AATGCCAATG GCCCATTTGT TATCTTAATG GTTGGCGTCA ATGGTGTGGG TAAAACTACT ACTATCGGTA AGTTGGCTAA ACAATATCAA AGCCAAGGTA AGTCTGTGAT GTTAGCCGCC GGTGATACCT TCCGCGCGGC AGCTGTCGAG CAATTACAGG TTTGGGGACA ACGCAACGAT ATTACCGTCG TCGCCCAGCA TACAGGTGCA GACAGTGCCT CTGTATTGTT CGATGCACTG CAAGCCGCTA AAGCGCGTAA AGTCGATGTG TTGATTGCTG ACACAGCGGG TCGCTTACAA AATAAAGCCC ATTTGATGGA AGAACTAAAG AAAGTGGTTC GGGTGATGAA GAAGCTCGAC CCAGAAGCGC CGCACGAGGT CATGCTAACA TTGGATGCGA GTACAGGCCA AAATGCGATA AGCCAAGCAC AGTTATTCCA AGAAGCCGTA GGTGTTACAG GGCTTACTAT CAGTAAGTTA GATGGAACCG CAAAGGGTGG TGTGGTATTT GCGATTGCCG ACAAGTTTAA TATTCCGATC CGTTACATAG GTGTCGGTGA GCAAATTGAT GATTTGCGGA CTTTTAATTC AAAAGAATTT ATCGATGCCT TGTTCACTCA AGAAAAAGCG GATAACTAA
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Protein sequence | MAKKGFFSWF RKDKSQDEVV AETPVVTPTQ DTADATERLA QQEQAEVQLA IEVEAHAHAE KQAAEQLTAE QAQAKTEAEQ FAVEHARIEA LDFAKQQAEA TRLATEQLRA EKHAAEDLAV AQLAAEQRIV EQLAAQQLAA EKAAAEQLAQ AETAQAVEPA AELQPEPQER PVKEGLFARL KRGLMRTSEN IGSGFIGLFR GKKIDDDLFE ELEEQLLIAD VGVETTTRLI NKLTEHASRK QLKDAEALYD LLRDELQKTL DPVAIPLVPN NANGPFVILM VGVNGVGKTT TIGKLAKQYQ SQGKSVMLAA GDTFRAAAVE QLQVWGQRND ITVVAQHTGA DSASVLFDAL QAAKARKVDV LIADTAGRLQ NKAHLMEELK KVVRVMKKLD PEAPHEVMLT LDASTGQNAI SQAQLFQEAV GVTGLTISKL DGTAKGGVVF AIADKFNIPI RYIGVGEQID DLRTFNSKEF IDALFTQEKA DN
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