Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0276 |
Symbol | |
ID | 5081103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 293225 |
End bp | 294058 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497393 |
Product | integrase catalytic subunit |
Protein accession | YP_001181808 |
Protein GI | 146291384 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTATGCC ACGTATTCAA CGTGAACCGG AGTAGCTACC GTTATTGGGC AAGCAGTGAG CTTGTGGCGA CACCAGAACA GCGACTTTTA GAATGTGAAA TCAAAGCGAT ACATGCTGAA AGTAAGGAGT CTGCGGGTGC GCGAAGTATA GCCACCATCG CTTCTGAACG TGGCTTTACG TTAAGTCGTT ATCGGGCGAC TCGGTTAATG AAAAAGCTTG GATTAGTGAG TTGCCAACAA CCCAAACACC GCTATAAAAA AGCTGAAAAT GAGCATGTGA CCATCCCTAA TTTACTCAAA CGACAATTTG CAGTTGTCGA ACCTAACACC GTTTGGTGTG GCGATGTGAC GTATATTTGG GCGGGTAATC GTTGGTGCTA TTTAGCGGTT GTGCTGGATT TATTTTCGAG AAAAGCCATT GGTTGGGCGA TGTCATTTTC ACCGGATACC GAGTTAACGG TGAAGGCGTT AGAAATGGCA TTTGAATCAC GGGGGAAGCC TAAAAACCTG ATATTTCATT CAGATCAAGG CTGCCATTAT ACCAGCCTGA AATACCGTCA ACGGTTGTGG AAATATCAAA TCACTCAAAG CATGAGCCGT CGCGGTAACT GCTGGGATAA TGCGCCAATG GAGCGATTTT TCAGGAGTTT AAAAACGGAA TGGCTCCCGA CACAAGGCTA CAAGAGTTTT AGCGAAGCTA AACAAGATGT GACTGATTAC ATCATTGGTT ATTACTGTGA AGTCAGGCCA CATCATTACA ATGCAGGATT GAGCCCAAAT GAATCAGAAC GACGATTTTG GGAAGATTCT AAAGTTGTGG CCAAATTTAA TTGA
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Protein sequence | MLCHVFNVNR SSYRYWASSE LVATPEQRLL ECEIKAIHAE SKESAGARSI ATIASERGFT LSRYRATRLM KKLGLVSCQQ PKHRYKKAEN EHVTIPNLLK RQFAVVEPNT VWCGDVTYIW AGNRWCYLAV VLDLFSRKAI GWAMSFSPDT ELTVKALEMA FESRGKPKNL IFHSDQGCHY TSLKYRQRLW KYQITQSMSR RGNCWDNAPM ERFFRSLKTE WLPTQGYKSF SEAKQDVTDY IIGYYCEVRP HHYNAGLSPN ESERRFWEDS KVVAKFN
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