Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0270 |
Symbol | |
ID | 5081097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | - |
Start bp | 287930 |
End bp | 290176 |
Gene Length | 2247 bp |
Protein Length | 748 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640497388 |
Product | copper-translocating P-type ATPase |
Protein accession | YP_001181803 |
Protein GI | 146291379 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTAAAA CAGGCTATAC TACAATACAA CTCAATATCC TCGGCGCAGG TTGCGCGAGT TGTGTTGGCA AAATTGAAAA AGCGATTAAC TGCGTGCAAG GCGTTGATTC GGCCGAAATG AACTTTGCCG ACAGAACAGT ACTTGTTTCG GGTAACGCAT CTGCCGAGTT GATTATAAAA GCAGTAGAAA GCGCTGGTTA TAATGCCACT CAAATACAGG CTGAGTCGGC AGAAGATGCC ATGAACGAGA AAGAACAGGC TGATTTACAA CATTATAAAA GTTTATTACG CCATACCATT ATCGCTTTGT CCGTCGGTAT CCCGTTGATG ATTTATGGAC TGTTTATTGG CGAAATGACG GTATCAACCC TATTAGAGCA AACTGTGTGG GGACTGGTCG GTGTGGTGAC TCTGGCAATT ATGCTTATAT CAGGTAGGCA TTTTTATATC GGCGCTTGGA AATCATTTTT AAACCATAAT GCCAATATGG ACACCCTCAT TGCCTTAGGT ACCGGTACTG CTTGGGTTTA CTCGATGTTG ATTGTTTCAT TTCCACAATT GTTCCCCGAG ATGGCAAGAC ATGTTTACTT TGAAGCGACC GCGATGATTA TTGGTTTAAT TAATCTTGGT TTAGCACTAG AAGTTAAAGC GCGCGGTAAA ACCTCTGAAG CGATTAAGCG TCTCATTGGT TTGCAAGCTA AAACTGCTCG GGTTATCCGT GATGGGAAAG ACCTCGACAT CGATATTGCT CATGTATTAC TTAATGATCA TGTAAAAGTT CGCCCTGGCG AAAAAATTCC AGTCGATGGG GTGGTTTTTG AGGGTAACAG CACCATTGAT GAATCAATGT TGACCGGTGA GCCAATGCCT GTTGAAAAAG TGATAGGTGA CGATGTGTTC ACTGGCACCT TGAATAAATC AGGCTCAATC ATATTTAAAG CCACTCGTGT AGGTAAGGAT ACCGCACTGG CTCGCATTAT TAGTATGGTC AAACGGGCGC AAAACTCTAA GCCGCCGATT GGGCGTTTAG CAGATGTCAT AGCCGCTTAC TTTGTGCCCG CTATTATGAT CATCGCTATA GTCAGTGCCA TGGTGTGGTT TAATTTTGGC CCTGAGCCGT CAAGTGTATT TGCCATCGTG TCTGCAACAA CAATATTAAT TATTGCTTGT CCTTGTGCGC TAGGTCTCGC AACGCCAATG TCAGTGATGG TTGGCGTTGG TAAGGCAGCT GAATCGGGGG TGCTTATTCG TAACGGTGAA GCATTGCAAA CCGCGTCTAA AATAACCGCC ATGATAATAG ATAAAACCGG CACCATTACT GAAGGTAAAC CGCAAGTTAC CGATATTATT TTGGTTAATG CCGACAGTGA AGAGCAGGTA CTTGCCTTGT CTGCTGGAAT CGAAAGTCAC TCCGAACATC CACTCGCGCA AGCTATTGTA GAAAGTGCGA ATGATAGAGG TATAGAAGCC ATTGACACTG AGCACTTCAA TGCCATTTCA GGTAAAGGTG TAGAAGCTGA AGTGGATGGC CAGACATTAC TATTTGGTAA TTTAAAACTG ATGTTAGACA AACACATTGA TATTGGCCTT CACGAAGCTA AGGCTCAAGT GTTAGCTGAA AATGCTAAAA CACCAATGTA TTTAGCGCTT GCAGGGCAAT TACTGGCTAT TATTGCGGTA TCAGATCCGA TAAAGCCTGA TTCAATTGAA GCGATTGCGA GACTGAAACT CAATGGCATC AAAGTGATTA TGTTAACCGG GGACAATAAA GCGACCGCCG CAGCAGTGGC TAAAAAAGTT GGTATTGATG ATTTTTTCGC AGAAGTCATG CCAGAAGATA AAGCCAATAA AGTAGCTGAA CTTCAGCAAC AAAATGAAGT GGTTGGCATG ACTGGCGATG GGATTAATGA CGCCCCCGCA TTAGCGTTAG CCGATGTTGG CTTTGCTATT GGAACAGGCA CTGATGTGGC GATAGAAAGC GCTGATGTGA CCTTAATGCG CGGATCACTT CATGGCTTAG CCGATGCGAT AGCCATTAGT AAAGCAACGC TGCGCAACAT TAAACAAAAC TTGTTTGGCG CGTTTATATA CAACGTCGCG GGTATTCCCT TAGCAGCAGG TGTGCTTTTT CCTGTTTTTG GTATTTTGCT AAATCCAGTG ATTGCTGGCG CTGCGATGGC CTTTTCATCA CTTACCGTAG TGAGTAACGC TAACCGTTTA CGTTTGTTTA AAGCCAAGGA ACACTAG
|
Protein sequence | MTKTGYTTIQ LNILGAGCAS CVGKIEKAIN CVQGVDSAEM NFADRTVLVS GNASAELIIK AVESAGYNAT QIQAESAEDA MNEKEQADLQ HYKSLLRHTI IALSVGIPLM IYGLFIGEMT VSTLLEQTVW GLVGVVTLAI MLISGRHFYI GAWKSFLNHN ANMDTLIALG TGTAWVYSML IVSFPQLFPE MARHVYFEAT AMIIGLINLG LALEVKARGK TSEAIKRLIG LQAKTARVIR DGKDLDIDIA HVLLNDHVKV RPGEKIPVDG VVFEGNSTID ESMLTGEPMP VEKVIGDDVF TGTLNKSGSI IFKATRVGKD TALARIISMV KRAQNSKPPI GRLADVIAAY FVPAIMIIAI VSAMVWFNFG PEPSSVFAIV SATTILIIAC PCALGLATPM SVMVGVGKAA ESGVLIRNGE ALQTASKITA MIIDKTGTIT EGKPQVTDII LVNADSEEQV LALSAGIESH SEHPLAQAIV ESANDRGIEA IDTEHFNAIS GKGVEAEVDG QTLLFGNLKL MLDKHIDIGL HEAKAQVLAE NAKTPMYLAL AGQLLAIIAV SDPIKPDSIE AIARLKLNGI KVIMLTGDNK ATAAAVAKKV GIDDFFAEVM PEDKANKVAE LQQQNEVVGM TGDGINDAPA LALADVGFAI GTGTDVAIES ADVTLMRGSL HGLADAIAIS KATLRNIKQN LFGAFIYNVA GIPLAAGVLF PVFGILLNPV IAGAAMAFSS LTVVSNANRL RLFKAKEH
|
| |