| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0246 |
|---|
| Symbol | |
|---|
| ID | 5079172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 262745 |
|---|
| End bp | 263848 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640497365 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001181780 |
|---|
| Protein GI | 146291356 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAAC ATCTCGATAA CATTACTGAT TGCCGTTCCC ATATAAATCA AGAACATGAT
GTCATTGACA TCTGTTTTCT TGTGCTTAGT GCCGTCATCT CAGGCGCTCA AAGCTGGTCT
GCTTGCCATG AATTCGGCAC ATTGGAATTG GAATGGTTAC GGAAATACCG CCCCTTTACC
AATGGTATTC CCAGCCAGCA GAGTATTGGT CGTATTTTTA GAGGAGTGTC GAAGCAATCA
CTGCTTGATG CACTGATGAG TTGGGTGAAT GAGTATCGCG TCAATACAGG ACAATCTTCT
ATTGCTATCG ATGGTAAAGT GTTAAAAGGT GCCAAAGCAT CAGCCTCAAG TGCGGCGTTA
CATATGGTAA CCGCATATGA TACAGGCTCT GGCTTAGTAT TCAGCGCGAA ATCAGGTGCG
AGTAAAAAGA GTGAACTTAA ACTTGTGCAA GAACTGCTTA CGTGTCTTGA TTTGAAATCG
GAATTACTTA CATTTGATGC GTTGCACTGT CAATCACAAA CACTTGATTA CATAGCAAAA
GAAGGTGGAG ATTGCATTCT GCAAGTAAAA GGGAATCAGC CCAAACTGTA CGAGGCTCTA
CAGGCACAAT TTACTGATTA CATTGAAAAT AACCCTGATG CAGAATGCTT TACCGAAACT
AATAAAGGGC ATGGTCGAGT TGAAAAACGA ATAACGTTTC AATGTCCACT GAATTTACCC
GCCGAGATAA AGATGAAGTG GTCTCAACTA AAAACATTAA TCGCAGTAGA ACGTCATCGA
AAAGTGGGTA ATAAAACCAG TATAGACACA CATTTTTATG TCAGCAGTGC AGTGCTAACA
TCAGAAGCCT TTGGTAGAGC GATTAGGGCT CATTGGCAAA CTGAAAATAA TCAACATTGG
CTTTTAGATA AGCTATTTCA AGAAGATAAG CAGAAAATGT ATGATGAAGA TGGCGCCAGT
ATCTTGGCCA TTTTACGCCG CTGGGCCTTA AATCTGGTGA AATTACACCC AGCTAAAACC
AGCCAAACTC AAAAATTTAA TCGAGCATGT TGGAGTGATG ACTTCAGAGA AGAGATTATT
TTTGGAACTG GTCAAAAAGT GTAA
|
|---|
| Protein sequence | MLKHLDNITD CRSHINQEHD VIDICFLVLS AVISGAQSWS ACHEFGTLEL EWLRKYRPFT
NGIPSQQSIG RIFRGVSKQS LLDALMSWVN EYRVNTGQSS IAIDGKVLKG AKASASSAAL
HMVTAYDTGS GLVFSAKSGA SKKSELKLVQ ELLTCLDLKS ELLTFDALHC QSQTLDYIAK
EGGDCILQVK GNQPKLYEAL QAQFTDYIEN NPDAECFTET NKGHGRVEKR ITFQCPLNLP
AEIKMKWSQL KTLIAVERHR KVGNKTSIDT HFYVSSAVLT SEAFGRAIRA HWQTENNQHW
LLDKLFQEDK QKMYDEDGAS ILAILRRWAL NLVKLHPAKT SQTQKFNRAC WSDDFREEII
FGTGQKV
|
|---|
| |