| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0227 |
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| Symbol | |
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| ID | 5079153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 247986 |
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| End bp | 249230 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640497347 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001181762 |
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| Protein GI | 146291338 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATGA CACTAATGCC GCCAGCAATA CTGGCGGCGG TATTTTGCGC GCTTCCGCTA
CGTGCCGAGC CGCAAGCACT GACATTACAA CAGGCAATAG ATAAAACACT GCAACACAAC
CCGCAGCTGC ATCAGTTTAA ATTTACCCAA CAGCGACTGC TGGCAGAGCG TGATGTGCAA
AGCCTTAAAC CCGGTTATCA ACTCGGTGTA GAGCTTGAGG ACGTTGCGGG CACCGGAGAG
GCCAGAGGGC TGGCCGGTGC TGAGCTGACA GTCGCCTTAT CTTCCGTGAT AGAGCTGGAT
AACAAAGCTC AGTGGCGCGC TGCGGTAGTA GACGCCAGGC TCAATACTCT TGATTGGCAG
CAACAAGCGC AAACCCTCGA TGTGCTGGCC GAACTTACCC GCAATTATAT TAATCTATTG
GCCAGCCAGC AGGAATTGAC ACTGACAGAA GAGGCAGTAG AGCTCTCAGA AGCCCTGCTG
CAAAGCGCAG AAAAACGTGC CGCCAGCGGT GCCTTGTCAG ATGCTGAAAT CATGCGGGCA
AAGGCGCAAC TGGCTCAGGT TCAGATCGGG CGGGACGCCC TGTTGCAGCG CATTGAGCGG
CAAAAAATAG CCATAGCACG TTTTTGGGGT GATACCAGCG CCAACTTTAA CGTTGTGGCA
GGTAATTTGT TTGCTTTTGG TCAAAGCCGC CCTTTTGCCG AGCTGTATCA GCGGCTGCAA
CAATCGCCGG CGTTAACCAT TTTTGCCTCT GAACGTCGGT TAAAAGACGC TGAAGTGCGA
CTGGCGCAAA GCCAAAACCG CGCAGATCTG AGTTGGCAAG TAGGGGTAAG ACGCATTCAG
GCCAGTGACG ATACAGGCCT TACCTTTGGT ATCTCAGTGC CATTATTTGC TGAACGTCGC
AATAGTGCAG CCATCGAAGC TGCGCTGGCA GAGCGAAACA ATGTCGAGTA TCGGCAGCAG
GATAGCTTAC TGATCCTGCA TGAACGCTTG TTTGATGCCT ACTCGCAACG GCAGCAATTC
ATTACCAGTC ACCAACAGTT GGCGCAGTAC GTGATCCCCA ACCTGGAACA AGCGCTGGAT
CTTACGCGTG ATGCATACCA GCGCGGGCGC TCAAATTATC AAGATTGGCT TAATGCCCAG
CAAGAATTGT TGCAGGCAAA AAGACAAATA CTGGAAACCG CCACTGCGGT GCTATTGAGC
CAGGCGACGA TTGAACAGCT TACCGCCGAG CCGGTAACGC AGTAA
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| Protein sequence | MRMTLMPPAI LAAVFCALPL RAEPQALTLQ QAIDKTLQHN PQLHQFKFTQ QRLLAERDVQ
SLKPGYQLGV ELEDVAGTGE ARGLAGAELT VALSSVIELD NKAQWRAAVV DARLNTLDWQ
QQAQTLDVLA ELTRNYINLL ASQQELTLTE EAVELSEALL QSAEKRAASG ALSDAEIMRA
KAQLAQVQIG RDALLQRIER QKIAIARFWG DTSANFNVVA GNLFAFGQSR PFAELYQRLQ
QSPALTIFAS ERRLKDAEVR LAQSQNRADL SWQVGVRRIQ ASDDTGLTFG ISVPLFAERR
NSAAIEAALA ERNNVEYRQQ DSLLILHERL FDAYSQRQQF ITSHQQLAQY VIPNLEQALD
LTRDAYQRGR SNYQDWLNAQ QELLQAKRQI LETATAVLLS QATIEQLTAE PVTQ
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