| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0226 |
|---|
| Symbol | |
|---|
| ID | 5079152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella putrefaciens CN-32 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009438 |
|---|
| Strand | - |
|---|
| Start bp | 246861 |
|---|
| End bp | 247907 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640497346 |
|---|
| Product | biotin/lipoyl attachment domain-containing protein |
|---|
| Protein accession | YP_001181761 |
|---|
| Protein GI | 146291337 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0845] Membrane-fusion protein |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAC ATCTAACACT GGCAATGTTT ATTGCAGCCT GGCTGATGCC GATGCAAGTA
ATGGCTGCCA ATGAGCAAGA ACATGCGCAT GTCCATGCCA AAGAGCAAGC GGTAAAACCG
CAATCTGACG CTAAGAAAAA TGAAGAGCAC GAAAAACACG GCGAGAACGA AGAACATGAA
GAACATGAAG AACACAATGA GCATGAAGGG CACGACGAAA ACGACGAGCA TGAACACAAT
GAAACCCTAA GCAGCCGCAT TAGTGATGAT ATGGCTACGG CGGTAAATAT TGTCACTGAT
CGTGCTGACA GCCAGTTATT ACGCCAACAT CAGGTGGTTT ATGGCAAGCT TAGTGCTGAT
CCAAACCGCA TAAGCCATGT TAATGCCCGT TTTCCCGGTC TTCTTACCTC GGTGAAATTC
TCACTGGGTG ACAGCGTAAA AGCAGGCGAT GTGCTGGCCG TTGTCGAGTC AAATGAGAGC
TTAAATACCT ATGCCATTAA AGCACCAATT GACGGCGTTG TTATTCAGCG CAGCGCCAAT
GTTGGTGAAA TCGCACAGCA GCAGACGCTG TTCAGCATTG CTGATTTTGG CAGCCTGTGG
GCCGATTTTC GCGTGTACCC ATCACAACAA GTTGCTGTCG CGACAGGACA AACAGTGGTC
ATTATGGCCG CTGACACTGA GATTAACGGC GTAATTGCGC ATATCATTCC GTCATTAACC
CAGCCCTATC AACTGGCCAG AGTTAAGCTG GATAAACGTG ACGGTAAACT GTCGTCCGGG
CAATTAATCG AGGGTGCTGT AATAAGCGGT GAATTCAACG TTGAGCTTGC CGTTAAAAAG
TCGGCCATTC AAATACTGGA CAATAAAAGC GGAGTCTTCG TAAAAAACAA TAGCGAATAT
GCCTTTACCC CATTACAGCT TGGCCGTAGC GACATGGATT ATGTCGAAGT GATTGCCGGT
TTAAAGCCCG GCCAGTGGTA TGTCACGACA AATAGCTATC TGTTAAAAGC GGATATTGAG
AAATCTGAAG CCGAGCACGC GCATTAA
|
|---|
| Protein sequence | MKSHLTLAMF IAAWLMPMQV MAANEQEHAH VHAKEQAVKP QSDAKKNEEH EKHGENEEHE
EHEEHNEHEG HDENDEHEHN ETLSSRISDD MATAVNIVTD RADSQLLRQH QVVYGKLSAD
PNRISHVNAR FPGLLTSVKF SLGDSVKAGD VLAVVESNES LNTYAIKAPI DGVVIQRSAN
VGEIAQQQTL FSIADFGSLW ADFRVYPSQQ VAVATGQTVV IMAADTEING VIAHIIPSLT
QPYQLARVKL DKRDGKLSSG QLIEGAVISG EFNVELAVKK SAIQILDNKS GVFVKNNSEY
AFTPLQLGRS DMDYVEVIAG LKPGQWYVTT NSYLLKADIE KSEAEHAH
|
|---|
| |