| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0225 |
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| Symbol | |
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| ID | 5079151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 243729 |
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| End bp | 246851 |
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| Gene Length | 3123 bp |
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| Protein Length | 1040 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497345 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001181760 |
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| Protein GI | 146291336 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAT CCATGTTGCG CCTGGCTATT GCGAGGCGGT ATCTATTTTT AACGCTGACA
CTGTTGATTA TTGCCATTGG TAGCTGGAGC TACCAACAGT TACCGATTGA TGCAGTGCCG
GATATTACTA ACGTTCAGGT ACAAATAAAC ACCGCAGCAC CGGGTTATTC GCCACTTGAG
GCCGAGCAGC GTATTACCTA TCCGGTAGAA ACTGCCCTGT ATGGCTTACC CAATTTAAGT
TATACCCGTT CTTTGTCTCG TTATGGCTTG TCACAGGTAA CGGTGGTATT TGAAGAAGGC
ACGGACATCT ACTTTGCCCG CAATCTAATC AACACCCGGT TGGGCGCTAT CAAGGATATG
TTGCCTGAGG GCATAGAGCC TGAAATGGGC CCTATTTCAA CCGGGCTTGG TGAAATCTTT
ATGTATACCG TGCAGGCCAA ACCGGGTGCA CTGCAACAAA ATGGTTCACC TTACGATGCC
ATGGCACTGC GGGAAATTCA GGACTGGATA ATAAAACCTC AGCTGGCACA AGTTAAAGGT
GTGGTGGAAG TAAACAGTAT TGGCGGCTAT AACAAGCAAT ACCATGTGTT ACCCGACCCA
CTGAAACTGC TTAATTATGG CCTGAGTATT AAGGATATTG AGCTGGCCCT GCAAGCCAAC
AATGACAACC GGGGTGCCGG TTATATTGAA CGTGAGGGCA TGCAACTGCT GGTACGCTCG
CCCGGTCAGT TAACCTCTCT GGATGACATT GCTAATGTCA TTATTACGCA ATACGACACA
ATACCGGTAA AGCTGAGTGA CGTTGCCGAT GTTGCCATTG GCAAAGAGCT GCGAACCGGT
GCGGCAACTC AGGATGGTAA AGAAGCTGTG CTGGGTACAG CCATGATGTT AATTGATGAA
AACTCACGCA CAGTGGCACG CGATGTGGCG CAAAAGCTGG AGCAGATCAA AAGCTCTCTG
CCAGAGGGTA TTATTGCTGA AGCCGTATAT GATCGCACCA CCTTAGTGGA TAAAGCCATT
GCAACCGTCA GTAAAAACCT GCTGGAAGGC GCATTACTGG TGATCGTAGT GTTGTTTATC
CTGCTGGGCA ACCTGCGGGG GGCGTTAATC ACTGCGGCGG TGATCCCGCT ATCAATGCTG
ATGACCATTA CCGGCATGGT ACAAGCCGGC GTTTCTGCCA ACCTGATGAG CCTGGGTGCG
CTGGATTTTG GCTTAATTGT TGATGGTACG GTGATTATTG TCGAGAATGC GGTTCGCCGC
CTGGCGCAGG CACAGCACAA CGGCCGTATC CAACCGCTAA AAGAGCGCTT AAATACGGTG
TATCTGGCAA CTGCAGAGGT TATCCGGCCC AGTTTGTTCG GTGTGGCCAT CATTACCATA
GTGTATATGC CTATTTTTTC GCTGACCGGT GTCGAAGGTA AAATGTTTCA TCCTATGGCA
GCGACTGTCG TTATTGCGCT GTTATCCGCC ATGGTGTTGT CACTGACGAT TGTACCAGCC
GCTGTGGCGG TGTTCTTAAA TGGTAAAATC AGTGAAAAAG AAAGTGCGGT TATCAGAAGC
GCTAAAACCT TGTACGCACC GCTATTAGCG CTGGCACTGA AATGGCGCGC TCTGGTCATC
GGTTTGGCCA GTGCTCTGGT TGGTGTGTGT CTGTGGCTGG CCACCACCCT GGGATCGGAG
TTTGTGCCTC AGCTTGATGA GGGCGATATC GCTTTACATG CCATGCGTAT TCCGGGCACC
GGCTTAGAAC AAGCCGTTGC AATGCAGGAA ATTCTGGAGC AGAAGATCAA AACCTTTGCT
GAGGTTGATA AAGTGTTTGC CAGAATTGGT ACCCCAGAAG TGGCGACCGA TCCGATGCCA
CCCAATGTGG CTGACAACTT TGTGATATTA AAACCGCGCA GTGAATGGCC CAATCCGGAT
AAAACCAAAG CCCAATTGGT CACTGAAATG GAAGCTGCTT TGGCGACATT GCCTGGCAAT
AACTATGAAT TTACCCAACC TATTCAGATG CGTTTTAATG AACTGATTTC CGGTGTACGG
GCAGATCTGG GTATTAAGGT ATTTGGTGAT GATTTAGATC AGCTGGTTAC AAGCGCTAAT
CAAATTCTGC AAGCGGTCAA CAAGGTGCAA GGTGCTGCGG ATACTAAAGT CGAACAAGTC
ACTGGTTTGC CAACCTTGTC GGTGATCCCC AATCGAACCG CGCTTGCCCG TTACGGCTTA
AATGTGGTTG AACTACAGGA TTGGGTAGCA GCGGCAATTG GTGGTACGTC GGCCGGTATT
CTGTATGAAG GTGACAGACG CTTTGAGCTG ATAGTGCGCT TGCCGGAAAC CCTGCGTCGC
GATCTGGACA AACTGGCAGT GTTGCCGGTG CCATTGCCAA ATGGGGACTT TGTGCCGTTG
CAGGAAGTGG CTACCTTAGA TTTATCGCCT GCGCCGGCAC AAATTAGTCG TGAAAATGGC
AAACGCCGGG TAGTGGTAAC CGCGAATGTG CGCGGGCGAG ACCTTGGTAG TTTTGTAGAA
GAGGTAAAGG CCCAAATCAA CCGTGACGTT ACATTACCAG CCGGTTACTG GCTGGACTAT
GGTGGTACTT TTGAGCAGCT GGAGTCCGCC AGTCAGCGCC TTAGCATCGT GGTGCCTGTT
ACGTTGCTGC TGATTTTAGG TATTCTGGTG ATGGCTTTTG CGTCATTTAA AGATGCGTTG
ATTATCTTCA GCGGTGTGCC GTTGGCGCTC ACCGGTGGTG TGTTGGCCTT GTATTTGAGG
GGTATGCCTT TATCAATCTC TGCCGGCATT GGCTTTATCG CCTTATCAGG CGTAGCGGTG
TTGAACGGTC TGGTGATGCT GAGCTTTATT CGCGATCTCT GGCGTGAGAA AGGTGACTTG
CTGTTAGCGA TAACGGAAGG CGCGCTTACC CGGTTGCGCC CTGTGCTAAT GACCGCTTTG
GTCGCGAGCC TCGGTTTTGT GCCGATGGCG ATTAATATTG GCACCGGTGC TGAAGTGCAG
CGCCCGCTGG CGACAGTGGT GATTGGCGGT ATTATTTCGT CAACCTTGCT GACATTGTTG
GTATTGCCCG TGTTATATCA TTGGGTGCAC AAAAACGATA ACCGCAAACA GCAAACGGAA
TAA
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| Protein sequence | MIESMLRLAI ARRYLFLTLT LLIIAIGSWS YQQLPIDAVP DITNVQVQIN TAAPGYSPLE
AEQRITYPVE TALYGLPNLS YTRSLSRYGL SQVTVVFEEG TDIYFARNLI NTRLGAIKDM
LPEGIEPEMG PISTGLGEIF MYTVQAKPGA LQQNGSPYDA MALREIQDWI IKPQLAQVKG
VVEVNSIGGY NKQYHVLPDP LKLLNYGLSI KDIELALQAN NDNRGAGYIE REGMQLLVRS
PGQLTSLDDI ANVIITQYDT IPVKLSDVAD VAIGKELRTG AATQDGKEAV LGTAMMLIDE
NSRTVARDVA QKLEQIKSSL PEGIIAEAVY DRTTLVDKAI ATVSKNLLEG ALLVIVVLFI
LLGNLRGALI TAAVIPLSML MTITGMVQAG VSANLMSLGA LDFGLIVDGT VIIVENAVRR
LAQAQHNGRI QPLKERLNTV YLATAEVIRP SLFGVAIITI VYMPIFSLTG VEGKMFHPMA
ATVVIALLSA MVLSLTIVPA AVAVFLNGKI SEKESAVIRS AKTLYAPLLA LALKWRALVI
GLASALVGVC LWLATTLGSE FVPQLDEGDI ALHAMRIPGT GLEQAVAMQE ILEQKIKTFA
EVDKVFARIG TPEVATDPMP PNVADNFVIL KPRSEWPNPD KTKAQLVTEM EAALATLPGN
NYEFTQPIQM RFNELISGVR ADLGIKVFGD DLDQLVTSAN QILQAVNKVQ GAADTKVEQV
TGLPTLSVIP NRTALARYGL NVVELQDWVA AAIGGTSAGI LYEGDRRFEL IVRLPETLRR
DLDKLAVLPV PLPNGDFVPL QEVATLDLSP APAQISRENG KRRVVVTANV RGRDLGSFVE
EVKAQINRDV TLPAGYWLDY GGTFEQLESA SQRLSIVVPV TLLLILGILV MAFASFKDAL
IIFSGVPLAL TGGVLALYLR GMPLSISAGI GFIALSGVAV LNGLVMLSFI RDLWREKGDL
LLAITEGALT RLRPVLMTAL VASLGFVPMA INIGTGAEVQ RPLATVVIGG IISSTLLTLL
VLPVLYHWVH KNDNRKQQTE
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