Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_0218 |
Symbol | |
ID | 5079144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 237269 |
End bp | 238300 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640497338 |
Product | IS630 orf |
Protein accession | YP_001181753 |
Protein GI | 146291329 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3335] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGATCA TAGCACCAAT TCCCCGTGAC GAACGACGCC TGATGCAGAA AGCTATCCAT AAAACGCGTG ATAAAAATTA TGCCCGCAGA CTGACCGCCA TGCTGATGTT GCACCGGGGC GAGCGCGTCA GTCATGTGGC CAGAACACTC TGCTGTGCCC GCTCATCGAT TGGTCGCTGG ATTAACTGGT TCACTCTGTC TGGTGCTGAA GGCCTGAAGT CATTACCGTC AGGACGTGGC AGGCGCTGGC CGTTCGAACA TATTTGCGCA TTGCTGCGTG AGCTTGTGAA GCATTCTCCC GGCGATTTCG GTTATCAGCG TTCCCGCTGG AGTACCGAAC TGCTGGCGAT AAAAATCCGT GATGTCACCG GTTGTCCGCT ACATGCCTCA ACCATCCGGA GATGGTTACC TGCTGCCGGG CTGGTATGGC GCAGAGCAGC GCCGACACTG CGTATCCGTG ACCCACACAA AGAAGAAAAA ATGGTCGCTA TCCATGAAGC ACTGGCGAAA TGCAGTGCGG AAAATCCCGT GTTTTCCGAA GATGAAGTGG ATATTCATCT CAACCCGAAA ATCGGTGCTG ACTGGCAGTT ACGCGGGCAG CAAAAACGTG TTGTCACACC GGGCCAGAAT GAAAAGTACT ATCTTGCCGG TGCGCTGCAC AGCGGTACGG GAAAAGTCAG CTACGTAGGT GGAAACAGTA AAGGTTCATC TTTATTTATC AGACTGTTAA AACATCTTAA GGCGACATAC CGGCGGGCAA AAACGATTAC GCTCATTGTC GATAACTACA TTATCCACAA AAGCCGTGAA ACGTTGCGCT GGCTGAAAGC AAACCAGAAG TTCAGGGTCA TTTATCAGCC GGTTTACTCG CCATGGGTCA ATCATGTCGA ACGGTTGTGG CAGGCGCTTC ATGAGACAAT AACCCGAAAT CACCAGTGCC GTTCAATGTG GCAACTGTTG AAAAAGGTTC ATCACTTTAT GGATACCGTC AGCCCATTCC CCGGTGGAAA ACACGGGCTG GCTAAAGTGT AG
|
Protein sequence | MPIIAPIPRD ERRLMQKAIH KTRDKNYARR LTAMLMLHRG ERVSHVARTL CCARSSIGRW INWFTLSGAE GLKSLPSGRG RRWPFEHICA LLRELVKHSP GDFGYQRSRW STELLAIKIR DVTGCPLHAS TIRRWLPAAG LVWRRAAPTL RIRDPHKEEK MVAIHEALAK CSAENPVFSE DEVDIHLNPK IGADWQLRGQ QKRVVTPGQN EKYYLAGALH SGTGKVSYVG GNSKGSSLFI RLLKHLKATY RRAKTITLIV DNYIIHKSRE TLRWLKANQK FRVIYQPVYS PWVNHVERLW QALHETITRN HQCRSMWQLL KKVHHFMDTV SPFPGGKHGL AKV
|
| |