Gene Sputcn32_0211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_0211 
Symbol 
ID5079137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand- 
Start bp232687 
End bp233547 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content44% 
IMG OID640497331 
ProductPTS system mannose/fructose/sorbose family IID subunit 
Protein accessionYP_001181746 
Protein GI146291322 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAATCG ATAATACCAA TAAAGACACT ACTGTTACCG AAAATAAACG CCTTACCTCT 
GGCGACCTTA GAAGTATGTT TTTAAGATCA AACGTCCTTC TGGCTTCAGC AAACTTTGAA 
CGTGTACAGA ATCTGGGTAT TTGCTATATC ATGATTCCTG CCATAAAACG GTTGTATGCG 
CCGGGTCCGG AAAGAATAGA AGCTCTTAAA AGACATCTGG AGTGGTTTAA TACTCAGCCC 
TACTGCGCCT CCCCCATATT GGGTGTTGCG GCGGCGATGG AAGAGGAAAA AGCAAACGGT 
GCACAGATTG AAGGGAATAG TATCAGTGGT GTAAAAATCG GTTTGATGGG TCCCTTCGCA 
GGTGTTGGAG ATCCTATTTT TTGGGGGACT ATCAGACCCG TTCTTGCTGC CCTGGGAGCC 
TCTCTTGCGT TAACCGGAAA TATCCTTGGC CCAATCATTT TTTTTGTATT GTTCAACGCA 
ATCCGTTTAG CACTGAAATA CTATGGTTTA AATTACGGAT ACCAGAAAGG AAGAGAAATT 
CTTAAGGATT TGGGTGGGGA TCGCCTTCAG AAACTGACAG AAGGTGCATC AATTCTGGGA 
CTGTTCGTTA TTGGCGCCCT GGTTTGTAAG TGGACGACAA TTAATGTACC GATTGTTGTA 
TCCCGTGTCA CACAGGCAGA TGGCCATGTC ACAGTAACAA CGCTGCAGAA CATCTTCGAT 
CAGTTACTTC CGGGAATGCT TCCTTTGGCT CTTACATTGT TAGTTGCAAG ATTGCTCAGG 
AAGAAACTGA GTCCCCTACT ATTGATTATG CTTATTTTTG CATTCGGTAT TCTGGGTTAC 
TGGGCTGGAA TATTGGCTTA A
 
Protein sequence
MSIDNTNKDT TVTENKRLTS GDLRSMFLRS NVLLASANFE RVQNLGICYI MIPAIKRLYA 
PGPERIEALK RHLEWFNTQP YCASPILGVA AAMEEEKANG AQIEGNSISG VKIGLMGPFA 
GVGDPIFWGT IRPVLAALGA SLALTGNILG PIIFFVLFNA IRLALKYYGL NYGYQKGREI 
LKDLGGDRLQ KLTEGASILG LFVIGALVCK WTTINVPIVV SRVTQADGHV TVTTLQNIFD 
QLLPGMLPLA LTLLVARLLR KKLSPLLLIM LIFAFGILGY WAGILA