| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_0208 |
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| Symbol | |
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| ID | 5079085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 227992 |
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| End bp | 230535 |
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| Gene Length | 2544 bp |
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| Protein Length | 847 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640497328 |
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| Product | pyruvate formate-lyase |
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| Protein accession | YP_001181743 |
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| Protein GI | 146291319 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1882] Pyruvate-formate lyase |
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| TIGRFAM ID | [TIGR01774] pyruvate formate-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TATCACAGGC TTTTGGTGAA CCAACTGACC GAATTCGTGC CTTACGGGAA
CAAATCCTTG ATACGACCCC CTGCATTGAG ACGGATCGTG CCCGCCTGAT CACCGAGTCC
TATAAGGAAA CGGAATCCCT GCCCATGATC ATCCGTCGCG CCAAAGCGCT TGAGAAGATC
CTTGCGGAAT TGCCGGTCAC CATCCGGGCA GGTGAACTAA TCGTTGGTAG TCTGACAGTC
ACTCCTCATT CCACACAAAT TTACCCGGAG TACTCAAATC GCTGGCTTCA GGATGAATTC
GATCGTCTGA ATCTGCGTAA AGGCGACCGT TTTACCATAA CCGATGAAGC GAAACAGCAG
CTGGATAGCG TATTTGGCTA CTGGGAAGGG AAAACAACGA ATGAACTGGC TACATCCTAT
ATGTTGCCTG AAACGCTTGA TTGCATGGCA GAAAATGTCT TCACTGTCGG CAACTATTAC
TTTAATGGCG TCGGTCATAT AGCCGTGGAC TACGCGCGTG TTCTCGCTCG TGGATACAAA
GGCATCATCC AGGATGTTGT TGCAGCAATG GCCAGCGCTG ATAAAAAAGA CCCCGCTTTT
CTGAAAAAAG AATCGTTCTA CAAGGCGGTC ATTATTTCTT GTAACGCAGC AATCAATTTT
GCTCATCGTT ACGCGGTTAA AGCTCGTACT CTCGCGGAAC AGGCCTCACC AGTCCGTAAA
AAAGAGCTGC TGAAAATTGC TGAAATCTGT GACAAAGTAC CTGAAAATGG TGCAAGTAAT
TTCTATGAAG CCTGCCAGTC ATTCTGGTTT GCCCATGCCA TTATTCAACT TGAATCCAAC
GGGCATTCTA TCTCCCCGGC GCGTTTCGAT CAGTACATGT ACCCTTACCT GGAAAAGGAC
AGCTCCCTGA GCGAGGAACA GGCGCAGGAA TTGCTGGATT GTCTGTGGCT CAAGTTCAAC
GACGTTAACA AGGTTCGTGA TGAAGGCTCG ACCAAAGGTT TTGGTGGCTA TCCGATGTTC
CAGAACCTGA TCGTTGGCGG TCAAACCAGC GGCGGACAGG ACGCCACTAA CAGACTGTCC
TTTATGGCCA TGACGGCTAC CGCCCATGTT CGTCTGCATG AACCTTCACT GTCAGTACGT
GTCTGGTCAA AATCTCCGGA CGATTTGTTA CTGAAAGCCT GTGAAGTCAG TCGTCTTGGT
ATGGGGATCC CGGCCTATTA CAACGATGAA GTTGTTATCC CTGCATTGAT TAACCGCGGC
CTGACCCTGG AAGATGCGCG GGAATACGGC ATCATCGGCT GCGTCGAACC TCAACGTCCG
GGAAAAACAG AAGGCTGGCA CGACGCCGCG TTCTATAACA TGAGTAAGGT ACTGGAAATA
ACCCTGAACA ACGGACGCTG CGGGGATAAA CAACTCGGCC CCAAAACTGG TGAGCTGGAT
TCATTCCAGA GTATTGAAGA CATCATTGAA GCTTATCGTA AACAGAACGA ATATTTTGTC
TATCATCTGG CAATGGCCGA TAACAGTGTT GACCTTGCTC ATATGGAACG GGCCCCCCTG
CCGTTCCTGT CCTGTATGGT GGATGACTGT ATCAGTCGCG GTAAAAGCGT TCAGGAAGGC
GGTGCCCATT ATAACTTCAC GGGTCCGCAA GGTGTCGGCG TTGCCAATGT GGGCGACTCG
CTGATGGCTA TCAAACGTCT GGTATTTGAA GAAGGCCAAT TATCGCTGGG TCATCTGAAA
GAAGCACTGG ATGCCAATTT CGGTGTATCT GGCGGGATAG AGAAACCTGA CACTATAGCC
ACTGAAAGTA CGCCGAAACA GGATGCAACC TATGAACTAG TCCTTGAGGC CGTGAAGAAA
GTGCTGGGCG AAAGCGGCGC ACTTGCACTC ACCTCACTCA ATAGCAACCC ACCGGAGCCT
GTCAAAGGGG CTAATGCCGG GCTGACAGCA GTGCGTCAGT TACTCATTAA TGGCGCCCCC
AAGTTCGGTA ATGACATTGA CGAAGTGGAT ATGCTGGCCC GTACCGGTGC TGAAATTTAC
TGTCGCGAGG TAGAAAAATA CACCAACCCA CGTGGCGGTT TATTCCAGGC TGGCTTATAT
CCGGTATCCG CTAATGTGGC TCTCGGTGAG AGCGTCGGGG CAACTCCAGA TGGACGTCTG
GCCGGCCAGC CGCTTCCCGA TGGGGTGTCG CCCAGCAGGG GCATGGATAC AAAAGGTCCA
ACCGCTGCCG CCAACTCAGT AGCCAAGCTG GATCACTTCC TGGCCTCAAA TGGCACGCTG
TTTAATCAGA AATTCCATCC GGCAGCTCTG AAAGGCGATG AGGGATTATA CCATCTGGCG
GCCTTACTGC GTGGTTATTT CGATCAGAAA GGCATGCATG TTCAGTTCAA TGTGATCGAC
CGTAATACAC TGCTGGCAGC ACAAAAAGAA CCAGAAAAAT ATCGTGATCT GGTTGTGCGT
GTGGCGGGTT ACAGTGCGCA ATTTGTCTCA CTGGATAAAA GCGTACAGGA CGATATTATC
CTGCGAACCG AACATGTCTT TTAA
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| Protein sequence | MSQLSQAFGE PTDRIRALRE QILDTTPCIE TDRARLITES YKETESLPMI IRRAKALEKI
LAELPVTIRA GELIVGSLTV TPHSTQIYPE YSNRWLQDEF DRLNLRKGDR FTITDEAKQQ
LDSVFGYWEG KTTNELATSY MLPETLDCMA ENVFTVGNYY FNGVGHIAVD YARVLARGYK
GIIQDVVAAM ASADKKDPAF LKKESFYKAV IISCNAAINF AHRYAVKART LAEQASPVRK
KELLKIAEIC DKVPENGASN FYEACQSFWF AHAIIQLESN GHSISPARFD QYMYPYLEKD
SSLSEEQAQE LLDCLWLKFN DVNKVRDEGS TKGFGGYPMF QNLIVGGQTS GGQDATNRLS
FMAMTATAHV RLHEPSLSVR VWSKSPDDLL LKACEVSRLG MGIPAYYNDE VVIPALINRG
LTLEDAREYG IIGCVEPQRP GKTEGWHDAA FYNMSKVLEI TLNNGRCGDK QLGPKTGELD
SFQSIEDIIE AYRKQNEYFV YHLAMADNSV DLAHMERAPL PFLSCMVDDC ISRGKSVQEG
GAHYNFTGPQ GVGVANVGDS LMAIKRLVFE EGQLSLGHLK EALDANFGVS GGIEKPDTIA
TESTPKQDAT YELVLEAVKK VLGESGALAL TSLNSNPPEP VKGANAGLTA VRQLLINGAP
KFGNDIDEVD MLARTGAEIY CREVEKYTNP RGGLFQAGLY PVSANVALGE SVGATPDGRL
AGQPLPDGVS PSRGMDTKGP TAAANSVAKL DHFLASNGTL FNQKFHPAAL KGDEGLYHLA
ALLRGYFDQK GMHVQFNVID RNTLLAAQKE PEKYRDLVVR VAGYSAQFVS LDKSVQDDII
LRTEHVF
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